RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeast

Gene DPB3, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB3	YBR278W	MTL1	P53214	551 aa		3.77	□□□□□ -1.81
DPB3	YBR278W	TRS130	Q03660	1102 aa		3.77	□□□□□ -1.81
DPB3	YBR278W	CTK1	Q03957	528 aa	Known RBP	3.77	□□□□□ -1.81
DPB3	YBR278W	DIN7	Q12086	430 aa		3.77	□□□□□ -1.81
DPB3	YBR278W	PHO5	P00635	467 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	URA3	P03962	267 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	LAT1	P12695	482 aa	Known RBP	3.76	□□□□□ -1.81
DPB3	YBR278W	GFA1	P14742	717 aa	Known RBP	3.76	□□□□□ -1.81
DPB3	YBR278W	ARG1	P22768	420 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	STE11	P23561	717 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	PEX1	P24004	1043 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	BEM3	P32873	1128 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	PSY4	P38193	441 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	FMO1	P38866	432 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	STT3	P39007	718 aa	Known RBP	3.76	□□□□□ -1.81
DPB3	YBR278W	YIR042C	P40586	236 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	BAP3	P41815	604 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	TAF1	P46677	1066 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	CPR6	P53691	371 aa	Known RBP	3.76	□□□□□ -1.81
DPB3	YBR278W	ARC35	P53731	342 aa	Known RBP	3.76	□□□□□ -1.81
DPB3	YBR278W	TRI1	Q05024	226 aa		3.76	□□□□□ -1.81
DPB3	YBR278W	MET3	P08536	511 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	TUP1	P16649	713 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	PRP6	P19735	899 aa	Predicted RBP	3.75	□□□□□ -1.81
DPB3	YBR278W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
DPB3	YBR278W	YCL049C	P25577	312 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	YBR053C	P38235	358 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	CRG1	P38892	291 aa	RIP-Chip data	3.75	□□□□□ -1.81	not detected
DPB3	YBR278W	CCT3	P39077	534 aa	Known RBP	3.75	□□□□□ -1.81
DPB3	YBR278W	ERP2	P39704	215 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	HOS4	P40480	1083 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	BUL1	P48524	976 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	YDL183C	P48569	320 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	UBA2	P52488	636 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	RGC1	Q06108	1083 aa	Known RBP	3.75	□□□□□ -1.81
DPB3	YBR278W	YCG1	Q06680	1035 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	DIA2	Q08496	732 aa	Predicted RBP	3.75	□□□□□ -1.81
DPB3	YBR278W	NEW1	Q08972	1196 aa	Known RBP	3.75	□□□□□ -1.81
DPB3	YBR278W	HOS1	Q12214	470 aa		3.75	□□□□□ -1.81
DPB3	YBR278W	SSM4	P40318	1319 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	TRP4	P07285	380 aa	Predicted RBP	3.74	□□□□□ -1.81
DPB3	YBR278W	MTF2	P10849	440 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	SIR1	P21691	654 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	RPA135	P22138	1203 aa	Known RBP	3.74	□□□□□ -1.81
DPB3	YBR278W	SEC15	P22224	910 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	TOD6	P34219	525 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	THI80	P35202	319 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	RMA1	P36001	430 aa	Known RBP	3.74	□□□□□ -1.81
DPB3	YBR278W	CDS1	P38221	457 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	NUP60	P39705	539 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	FTR1	P40088	404 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	PUG1	P40100	303 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	ELO3	P40319	345 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	YIL077C	P40508	320 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	TAH11	P47112	604 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	AMA1	P50082	593 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	MUP1	P50276	574 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	MDR1	P53258	950 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	FDC1	Q03034	503 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	COG4	Q06096	861 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	AIM41	Q12032	185 aa		3.74	□□□□□ -1.81
DPB3	YBR278W	CAF20	P12962	161 aa	Known RBP	3.73	□□□□□ -1.81
DPB3	YBR278W	FEN2	P25621	512 aa	Known RBP	3.73	□□□□□ -1.81
DPB3	YBR278W	MVD1	P32377	396 aa	Known RBP	3.73	□□□□□ -1.81
DPB3	YBR278W	FRD1	P32614	470 aa	Known RBP	3.73	□□□□□ -1.81
DPB3	YBR278W	PPE1	P38796	400 aa		3.73	□□□□□ -1.81
DPB3	YBR278W	SMK1	P41808	388 aa		3.73	□□□□□ -1.81
DPB3	YBR278W	TIM50	Q02776	476 aa		3.73	□□□□□ -1.81
DPB3	YBR278W	DLT1	Q04216	342 aa		3.73	□□□□□ -1.81
DPB3	YBR278W	OPY2	Q06810	360 aa		3.73	□□□□□ -1.81
DPB3	YBR278W	IWR1	Q07532	353 aa	Predicted RBP	3.73	□□□□□ -1.81
DPB3	YBR278W	CRD1	Q07560	283 aa		3.73	□□□□□ -1.81
DPB3	YBR278W	AAD4	Q07747	329 aa		3.73	□□□□□ -1.81
DPB3	YBR278W	MIS1	P09440	975 aa	Known RBP	3.72	□□□□□ -1.81
DPB3	YBR278W	POL3	P15436	1097 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	NCP1	P16603	691 aa	Known RBP	3.72	□□□□□ -1.81
DPB3	YBR278W	MCM3	P24279	971 aa	Known RBP	3.72	□□□□□ -1.81
DPB3	YBR278W	MCM10	P32354	571 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	RPN12	P32496	274 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	BCS1	P32839	456 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	XRS2	P33301	854 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	YBR138C	P38277	524 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	EHT1	P38295	451 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	COS111	P38308	924 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	BCD1	P38772	366 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	PIG2	P40187	538 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	RAD26	P40352	1085 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	GSM1	P42950	618 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	RFX1	P48743	811 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	MNN10	P50108	393 aa	Known RBP	3.72	□□□□□ -1.81
DPB3	YBR278W	MCM6	P53091	1017 aa	Known RBP	3.72	□□□□□ -1.81
DPB3	YBR278W	MRPL13	Q02204	264 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	YFT2	Q06676	274 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	CHS5	Q12114	671 aa	Known RBP	3.72	□□□□□ -1.81
DPB3	YBR278W	RRI2	Q12348	645 aa		3.72	□□□□□ -1.81
DPB3	YBR278W	TUF1	P02992	437 aa	Known RBP	3.71	□□□□□ -1.82
DPB3	YBR278W	PCK1	P10963	549 aa		3.71	□□□□□ -1.82
DPB3	YBR278W	UBC1	P21734	215 aa	Known RBP	3.71	□□□□□ -1.82
DPB3	YBR278W	RIT1	P23796	513 aa		3.71	□□□□□ -1.82
DPB3	YBR278W	SWI4	P25302	1093 aa	Known RBP	3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms