RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C CKB2P38930 258 aa7.14□□□□□ -1.27
TDP1YBR223C GEM1P39722 662 aa7.14□□□□□ -1.27
TDP1YBR223C RPT2P40327 437 aaKnown RBP7.14□□□□□ -1.27
TDP1YBR223C PFK26P40433 827 aaKnown RBP7.14□□□□□ -1.27
TDP1YBR223C BIO4P53630 237 aa7.14□□□□□ -1.27
TDP1YBR223C YNL108CP53929 270 aa7.14□□□□□ -1.27
TDP1YBR223C UBP2Q01476 1272 aa7.14□□□□□ -1.27
TDP1YBR223C ADI1Q03677 179 aa7.14□□□□□ -1.27
TDP1YBR223C ARO80Q04052 950 aa7.14□□□□□ -1.27
TDP1YBR223C YET3Q07451 203 aa7.14□□□□□ -1.27
TDP1YBR223C YBL036CP38197 257 aa7.13□□□□□ -1.27
TDP1YBR223C SIP5P40210 489 aaKnown RBP7.13□□□□□ -1.27
TDP1YBR223C AXL1P40851 1208 aa7.13□□□□□ -1.27
TDP1YBR223C RNR4P49723 345 aaKnown RBP7.13□□□□□ -1.27
TDP1YBR223C LSC1P53598 329 aaKnown RBP7.13□□□□□ -1.27
TDP1YBR223C ELP3Q02908 557 aaKnown RBP7.13□□□□□ -1.27
TDP1YBR223C GPN2Q08726 347 aaPredicted RBP7.13□□□□□ -1.27
TDP1YBR223C GPM3Q12326 303 aa7.13□□□□□ -1.27
TDP1YBR223C SPE4Q12455 300 aa7.13□□□□□ -1.27
TDP1YBR223C AVL9Q12500 764 aa7.13□□□□□ -1.27
TDP1YBR223C VPS5Q92331 675 aa7.13□□□□□ -1.27
TDP1YBR223C IMA3P0CW40 589 aa7.12□□□□□ -1.27
TDP1YBR223C IMA4P0CW41 589 aa7.12□□□□□ -1.27
TDP1YBR223C MLS1P30952 554 aa7.12□□□□□ -1.27
TDP1YBR223C SRB2P34162 210 aa7.12□□□□□ -1.27
TDP1YBR223C DIA4P38705 446 aaPredicted RBP7.12□□□□□ -1.27
TDP1YBR223C YIL001WP40560 513 aa7.12□□□□□ -1.27
TDP1YBR223C ULI1P43604 169 aa7.12□□□□□ -1.27
TDP1YBR223C YJR054WP47114 497 aa7.12□□□□□ -1.27
TDP1YBR223C PAN2P53010 1115 aaPredicted RBP7.12□□□□□ -1.27
TDP1YBR223C DAK1P54838 584 aaKnown RBP7.12□□□□□ -1.27
TDP1YBR223C MZM1Q03429 123 aaPredicted RBP7.12□□□□□ -1.27
TDP1YBR223C RKM2Q03942 479 aa7.12□□□□□ -1.27
TDP1YBR223C BUD22Q04347 519 aaKnown RBP7.12□□□□□ -1.27
TDP1YBR223C FMP25Q08023 583 aa7.12□□□□□ -1.27
TDP1YBR223C IMA2Q08295 589 aa7.12□□□□□ -1.27
TDP1YBR223C YPR027CQ12079 277 aa7.12□□□□□ -1.27
TDP1YBR223C TEF1P02994 458 aaKnown RBP7.12□□□□□ -1.27
TDP1YBR223C MAS2P11914 482 aa7.12□□□□□ -1.27
TDP1YBR223C GCD2P12754 651 aaPredicted RBP7.12□□□□□ -1.27
TDP1YBR223C SEC14P24280 304 aaKnown RBP7.12□□□□□ -1.27
TDP1YBR223C VBA3P25594 458 aa7.12□□□□□ -1.27
TDP1YBR223C CDC20P26309 610 aa7.12□□□□□ -1.27
TDP1YBR223C VBA5P36172 582 aa7.12□□□□□ -1.27
TDP1YBR223C APN2P38207 520 aa7.12□□□□□ -1.27
TDP1YBR223C YHR054CP38780 354 aa7.12□□□□□ -1.27
TDP1YBR223C RSC30P38781 883 aa7.12□□□□□ -1.27
TDP1YBR223C STN1P38960 494 aa7.12□□□□□ -1.27
TDP1YBR223C YJL206CP39529 758 aa7.12□□□□□ -1.27
TDP1YBR223C ERP2P39704 215 aa7.12□□□□□ -1.27
TDP1YBR223C SEC26P41810 973 aaKnown RBP7.12□□□□□ -1.27
TDP1YBR223C MDJ2P42834 146 aa7.12□□□□□ -1.27
TDP1YBR223C TAF1P46677 1066 aa7.12□□□□□ -1.27
TDP1YBR223C ASG7P46993 209 aa7.12□□□□□ -1.27
TDP1YBR223C PRP3Q03338 469 aaPredicted RBP7.12□□□□□ -1.27
TDP1YBR223C HFD1Q04458 532 aa7.12□□□□□ -1.27
TDP1YBR223C ADY3Q07732 790 aa7.12□□□□□ -1.27
TDP1YBR223C MDM38Q08179 573 aa7.12□□□□□ -1.27
TDP1YBR223C THI21Q08975 551 aa7.12□□□□□ -1.27
TDP1YBR223C YLL056CQ12177 298 aa7.12□□□□□ -1.27
TDP1YBR223C TIF1P10081 395 aaKnown RBP7.11□□□□□ -1.27
TDP1YBR223C NPP1P25353 742 aa7.11□□□□□ -1.27
TDP1YBR223C SNT1P25357 1226 aa7.11□□□□□ -1.27
TDP1YBR223C YCR015CP25616 317 aa7.11□□□□□ -1.27
TDP1YBR223C MCM5P29496 775 aaKnown RBP7.11□□□□□ -1.27
TDP1YBR223C SIN4P32259 974 aa7.11□□□□□ -1.27
TDP1YBR223C SEC6P32844 805 aa7.11□□□□□ -1.27
TDP1YBR223C FLR1P38124 548 aa7.11□□□□□ -1.27
TDP1YBR223C LYS9P38999 446 aa7.11□□□□□ -1.27
TDP1YBR223C ALG5P40350 334 aa7.11□□□□□ -1.27
TDP1YBR223C YJL107CP42947 387 aa7.11□□□□□ -1.27
TDP1YBR223C TAH11P47112 604 aa7.11□□□□□ -1.27
TDP1YBR223C TEP1P53916 434 aa7.11□□□□□ -1.27
TDP1YBR223C ATP25Q03153 612 aa7.11□□□□□ -1.27
TDP1YBR223C JIP4Q03361 876 aa7.11□□□□□ -1.27
TDP1YBR223C YSH1Q06224 779 aaPredicted RBP7.11□□□□□ -1.27
TDP1YBR223C TPO1Q07824 586 aa7.11□□□□□ -1.27
TDP1YBR223C CHS1P08004 1131 aa7.1□□□□□ -1.27
TDP1YBR223C GPA2P10823 449 aa7.1□□□□□ -1.27
TDP1YBR223C YPK1P12688 680 aaKnown RBP7.1□□□□□ -1.27
TDP1YBR223C EXO70P19658 623 aa7.1□□□□□ -1.27
TDP1YBR223C CLB4P24871 460 aa7.1□□□□□ -1.27
TDP1YBR223C RGT1P32862 1170 aa7.1□□□□□ -1.27
TDP1YBR223C TIM23P32897 222 aa7.1□□□□□ -1.27
TDP1YBR223C KES1P35844 434 aaKnown RBP7.1□□□□□ -1.27
TDP1YBR223C TBS1P38114 1094 aa7.1□□□□□ -1.27
TDP1YBR223C PCS60P38137 543 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
TDP1YBR223C AVT2P39981 480 aa7.1□□□□□ -1.27
TDP1YBR223C PRK1P40494 810 aa7.1□□□□□ -1.27
TDP1YBR223C FAR3P46671 204 aa7.1□□□□□ -1.27
TDP1YBR223C SCS3P53012 380 aa7.1□□□□□ -1.27
TDP1YBR223C USE1P53146 245 aa7.1□□□□□ -1.27
TDP1YBR223C NMA111P53920 997 aa7.1□□□□□ -1.27
TDP1YBR223C FMN1Q03778 218 aa7.1□□□□□ -1.27
TDP1YBR223C PUS5Q06244 254 aa7.1□□□□□ -1.27
TDP1YBR223C CDD1Q06549 142 aa7.1□□□□□ -1.27
TDP1YBR223C DIS3Q08162 1001 aaKnown RBP7.1□□□□□ -1.27
TDP1YBR223C CIR2Q08822 631 aa7.1□□□□□ -1.27
TDP1YBR223C MOT1P32333 1867 aa7.1□□□□□ -1.27
TDP1YBR223C LAA1P39526 2014 aa7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms