RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
TARDBP-218ENST00000617172 WDR66Q8TBY9 1149 aa12.05□□□□□ -0.48
TARDBP-218ENST00000617172 TEKT1Q969V4 418 aa12.05□□□□□ -0.48
TARDBP-218ENST00000617172 TDRD3Q9H7E2 651 aaKnown RBP12.05□□□□□ -0.48
TARDBP-218ENST00000617172 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-218ENST00000617172 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
TARDBP-218ENST00000617172 LRRFIP2Q9Y608 721 aaKnown RBP12.05□□□□□ -0.48
TARDBP-218ENST00000617172 ALDH1A1P00352 501 aa12.04□□□□□ -0.48
TARDBP-218ENST00000617172 ZBTB48P10074 688 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-218ENST00000617172 DGKZQ13574 1117 aa12.04□□□□□ -0.48
TARDBP-218ENST00000617172 NBPF12Q5TAG4 269 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-218ENST00000617172 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
TARDBP-218ENST00000617172 DIEXFQ68CQ4 756 aaKnown RBP12.04□□□□□ -0.48
TARDBP-218ENST00000617172 HHIPL2Q6UWX4 724 aa12.04□□□□□ -0.48
TARDBP-218ENST00000617172 ATF7IPQ6VMQ6 1270 aa12.04□□□□□ -0.48
TARDBP-218ENST00000617172 SIL1Q9H173 461 aa12.04□□□□□ -0.48
TARDBP-218ENST00000617172 COPRSQ9NQ92 184 aa12.04□□□□□ -0.48
TARDBP-218ENST00000617172 ZNF646O15015 1829 aaPredicted RBP12.03□□□□□ -0.48
TARDBP-218ENST00000617172 MANSC4A6NHS7 340 aaPredicted RBP12.03□□□□□ -0.48
TARDBP-218ENST00000617172 ZBTB22O15209 634 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 ATP2B3Q16720 1220 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 NOM1Q5C9Z4 860 aaKnown RBP12.03□□□□□ -0.48
TARDBP-218ENST00000617172 FKBP1CQ5VVH2 108 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 HOOK2Q96ED9 719 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 ZDHHC15Q96MV8 337 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 MEIS3Q99687 375 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 MCOLN1Q9GZU1 580 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 TMOD2Q9NZR1 351 aa12.03□□□□□ -0.48
TARDBP-218ENST00000617172 CCDC85CA6NKD9 419 aa12.02□□□□□ -0.49
TARDBP-218ENST00000617172 SEMA3EO15041 775 aa12.02□□□□□ -0.49
TARDBP-218ENST00000617172 USP2O75604 605 aaPredicted RBP12.02□□□□□ -0.49
TARDBP-218ENST00000617172 TRIM27P14373 513 aa12.02□□□□□ -0.49
TARDBP-218ENST00000617172 MTX1Q13505 466 aa12.02□□□□□ -0.49
TARDBP-218ENST00000617172 MIER1Q8N108 512 aa12.02□□□□□ -0.49
TARDBP-218ENST00000617172 FRAT1Q92837 279 aaPredicted RBP12.02□□□□□ -0.49
TARDBP-218ENST00000617172 CFHR5Q9BXR6 569 aa12.02□□□□□ -0.49
TARDBP-218ENST00000617172 AKAP2Q9Y2D5 859 aa12.02□□□□□ -0.49
TARDBP-218ENST00000617172 TCP10L2B9ZVM9 353 aa12.01□□□□□ -0.49
TARDBP-218ENST00000617172 SRGAP3O43295 1099 aa12.01□□□□□ -0.49
TARDBP-218ENST00000617172 GNAI2P04899 355 aa12.01□□□□□ -0.49
TARDBP-218ENST00000617172 HNRNPUQ00839 825 aaKnown RBP eCLIP12.01□□□□□ -0.49
TARDBP-218ENST00000617172 MKRN3Q13064 507 aaKnown RBP12.01□□□□□ -0.49
TARDBP-218ENST00000617172 GRIK5Q16478 980 aa12.01□□□□□ -0.49
TARDBP-218ENST00000617172 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
TARDBP-218ENST00000617172 OTUD7BQ6GQQ9 843 aa12.01□□□□□ -0.49
TARDBP-218ENST00000617172 FAM83AQ86UY5 434 aa12.01□□□□□ -0.49
TARDBP-218ENST00000617172 ZGPATQ8N5A5 531 aaKnown RBP12.01□□□□□ -0.49
TARDBP-218ENST00000617172 DENND2AQ9ULE3 1009 aa12.01□□□□□ -0.49
TARDBP-218ENST00000617172 AOX1Q06278 1338 aa12.01□□□□□ -0.49
TARDBP-218ENST00000617172 BCAR3O75815 825 aa12□□□□□ -0.49
TARDBP-218ENST00000617172 TBC1D8O95759 1140 aa12□□□□□ -0.49
TARDBP-218ENST00000617172 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
TARDBP-218ENST00000617172 APOBEC3HQ6NTF7 200 aaKnown RBP12□□□□□ -0.49
TARDBP-218ENST00000617172 CTU1Q7Z7A3 348 aaKnown RBP12□□□□□ -0.49
TARDBP-218ENST00000617172 WNK4Q96J92 1243 aa12□□□□□ -0.49
TARDBP-218ENST00000617172 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
TARDBP-218ENST00000617172 TEPSINQ96N21 525 aa12□□□□□ -0.49
TARDBP-218ENST00000617172 FZD1Q9UP38 647 aa12□□□□□ -0.49
TARDBP-218ENST00000617172 PA2G4Q9UQ80 394 aaKnown RBP12□□□□□ -0.49
TARDBP-218ENST00000617172 A0A1B0GUL6 1792 aa12□□□□□ -0.49
TARDBP-218ENST00000617172 GPR25O00155 361 aa11.99□□□□□ -0.49
TARDBP-218ENST00000617172 LDHBP07195 334 aaKnown RBP11.99□□□□□ -0.49
TARDBP-218ENST00000617172 MAP3K9P80192 1104 aa11.99□□□□□ -0.49
TARDBP-218ENST00000617172 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
TARDBP-218ENST00000617172 TMEM39BQ9GZU3 492 aa11.99□□□□□ -0.49
TARDBP-218ENST00000617172 SALL1Q9NSC2 1324 aa11.99□□□□□ -0.49
TARDBP-218ENST00000617172 SSC5DA1L4H1 1573 aa11.98□□□□□ -0.49
TARDBP-218ENST00000617172 RGS19P49795 217 aa11.98□□□□□ -0.49
TARDBP-218ENST00000617172 MVPQ14764 893 aaKnown RBP11.98□□□□□ -0.49
TARDBP-218ENST00000617172 CCDC102BQ68D86 513 aa11.98□□□□□ -0.49
TARDBP-218ENST00000617172 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
TARDBP-218ENST00000617172 ZNF296Q8WUU4 475 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-218ENST00000617172 CLUAP1Q96AJ1 413 aa11.98□□□□□ -0.49
TARDBP-218ENST00000617172 CSADQ9Y600 493 aa11.98□□□□□ -0.49
TARDBP-218ENST00000617172 PDS5AQ29RF7 1337 aaKnown RBP11.97□□□□□ -0.49
TARDBP-218ENST00000617172 A0A1B0GUL7 405 aa11.97□□□□□ -0.49
TARDBP-218ENST00000617172 TESPA1A2RU30 521 aaPredicted RBP11.97□□□□□ -0.49
TARDBP-218ENST00000617172 FKTNO75072 461 aa11.97□□□□□ -0.49
TARDBP-218ENST00000617172 PHKA1P46020 1223 aa11.97□□□□□ -0.49
TARDBP-218ENST00000617172 TIMM10P62072 90 aa11.97□□□□□ -0.49
TARDBP-218ENST00000617172 G3BP1Q13283 466 aaKnown RBP eCLIP11.97□□□□□ -0.495e-9■□□□□ 10.1
TARDBP-218ENST00000617172 DCAF15Q66K64 600 aa11.97□□□□□ -0.49
TARDBP-218ENST00000617172 SPTY2D1Q68D10 685 aaPredicted RBP11.97□□□□□ -0.49
TARDBP-218ENST00000617172 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.97□□□□□ -0.49
TARDBP-218ENST00000617172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.97□□□□□ -0.49
TARDBP-218ENST00000617172 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
TARDBP-218ENST00000617172 PRDX5P30044 214 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 GTF2A2P52657 109 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 CACNB3P54284 484 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 TFCP2Q12800 502 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 GORABQ5T7V8 394 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.49
TARDBP-218ENST00000617172 FAM151AQ8WW52 585 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 OPTNQ96CV9 577 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 XAGE2Q96GT9 111 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
TARDBP-218ENST00000617172 CASP8AP2Q9UKL3 1982 aa11.96□□□□□ -0.5
TARDBP-218ENST00000617172 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms