RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	SMC2	O95347	1197 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	IFIT1	P09914	478 aa	Known RBP	11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	PDILT	Q8N807	584 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	PTMS	P20962	102 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	FGFR2	P21802	821 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	ATP2B3	Q16720	1220 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	SYNE3	Q6ZMZ3	975 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	DBNDD2	Q9BQY9	259 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	LIMCH1	Q9UPQ0	1083 aa		11.51	□□□□□ -0.57
FARP1-222	ENST00000597777	CLSTN1	O94985	981 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	PTH1R	Q03431	593 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	SKIDA1	Q1XH10	827 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	VPS53	Q5VIR6	699 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	LPIN2	Q92539	896 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	SNX21	Q969T3	373 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	EPB41L2	O43491	1005 aa	Known RBP	11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	RBM25	P49756	843 aa	Known RBP	11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	HOMER1	Q86YM7	354 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	HAUS7	Q99871	368 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	HIP1	O00291	1037 aa		11.5	□□□□□ -0.57
FARP1-222	ENST00000597777	UQCRHL	A0A096LP55	91 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	ZBTB22	O15209	634 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	MBD3	O95983	291 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	UQCRH	P07919	91 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	KRT85	P78386	507 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	STK38	Q15208	465 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	ADCK5	Q3MIX3	580 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	CCDC158	Q5M9N0	1113 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	MICU3	Q86XE3	530 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	CWC22	Q9HCG8	908 aa	Known RBP	11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	TMEM63C	Q9P1W3	806 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	HOXA10	P31260	410 aa	Predicted RBP	11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	XAGE2	Q96GT9	111 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	BRIP1	Q9BX63	1249 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	PARP3	Q9Y6F1	533 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	SNAP23	O00161	211 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	SLC5A1	P13866	664 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	RPS8	P62241	208 aa	Known RBP	11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	CCDC173	Q0VFZ6	552 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	GRAP	Q13588	217 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	GRAPL	Q8TC17	118 aa	Predicted RBP	11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	SLC16A10	Q8TF71	515 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	ANKRD2	Q9GZV1	360 aa		11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
FARP1-222	ENST00000597777		V9GYY5	206 aa	Predicted RBP	11.49	□□□□□ -0.57
FARP1-222	ENST00000597777	JAK2	O60674	1132 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	SYT1	P21579	422 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	PSMA5	P28066	241 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	TMC4	Q7Z404	712 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	RBM17	Q96I25	401 aa	Known RBP	11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	TPM2	P07951	284 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	CHRND	Q07001	517 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	C16orf45	Q96MC5	204 aa	Predicted RBP	11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	TAF1	P21675	1872 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	KIN	O60870	393 aa	Known RBP	11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	PTPN21	Q16825	1174 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	KLHL40	Q2TBA0	621 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	RPGR	Q92834	1020 aa	Known RBP	11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	CRAMP1	Q96RY5	1269 aa		11.48	□□□□□ -0.57
FARP1-222	ENST00000597777	COL11A2	P13942	1736 aa	Predicted RBP	11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	ADCY5	O95622	1261 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	APOBR	Q0VD83	1088 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	UBE4A	Q14139	1066 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	DEFB132	Q7Z7B7	95 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	CELF1	Q92879	486 aa	Known RBP	11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	ZKSCAN3	Q9BRR0	538 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	UQCRFS1P1	P0C7P4	283 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	AKAP17A	Q02040	695 aa	Known RBP	11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	CSPP1	Q1MSJ5	1256 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	NUP62CL	Q9H1M0	184 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	RAD50	Q92878	1312 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	MMP10	P09238	476 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	ARID4A	P29374	1257 aa	Predicted RBP	11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	PDE6B	P35913	854 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	ZSCAN30	Q86W11	494 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	DACT1	Q9NYF0	836 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	MINPP1	Q9UNW1	487 aa		11.47	□□□□□ -0.57
FARP1-222	ENST00000597777	GOLGA6L6	A8MZA4	724 aa		11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	MARCKS	P29966	332 aa	Predicted RBP	11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	IL25	Q9H293	177 aa		11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	AKAP11	Q9UKA4	1901 aa		11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	ATP2B2	Q01814	1243 aa		11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	TRIM29	Q14134	588 aa		11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	TPD52L1	Q16890	204 aa	Predicted RBP	11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	KLHL10	Q6JEL2	608 aa		11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	DLEC1	Q9Y238	1755 aa		11.46	□□□□□ -0.57
FARP1-222	ENST00000597777	LTBP1	Q14766	1721 aa		11.46	□□□□□ -0.58
FARP1-222	ENST00000597777	PI16	Q6UXB8	463 aa		11.46	□□□□□ -0.58
FARP1-222	ENST00000597777	KIF2C	Q99661	725 aa		11.46	□□□□□ -0.58
FARP1-222	ENST00000597777	DOCK2	Q92608	1830 aa		11.46	□□□□□ -0.58
FARP1-222	ENST00000597777	hCG_1642624	A0A1W2PR95	340 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	BBOX1	O75936	387 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	ADORA1	P30542	326 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	MCM2	P49736	904 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	DHX8	Q14562	1220 aa	Known RBP	11.45	□□□□□ -0.58
FARP1-222	ENST00000597777		Q6ZUG5	572 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	LUZP1	Q86V48	1076 aa		11.45	□□□□□ -0.58

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