RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
RPA1-206ENST00000573994 UBE4AQ14139 1066 aa12.5□□□□□ -0.41
RPA1-206ENST00000573994 PRAMEF18Q5VWM3 479 aa12.5□□□□□ -0.41
RPA1-206ENST00000573994 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
RPA1-206ENST00000573994 FRAT1Q92837 279 aaPredicted RBP12.5□□□□□ -0.41
RPA1-206ENST00000573994 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
RPA1-206ENST00000573994 HDAC9Q9UKV0 1011 aa12.5□□□□□ -0.41
RPA1-206ENST00000573994 PCDHAC2Q9Y5I4 1007 aa12.5□□□□□ -0.41
RPA1-206ENST00000573994 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
RPA1-206ENST00000573994 HIBADHP31937 336 aaKnown RBP12.49□□□□□ -0.41
RPA1-206ENST00000573994 C2orf69Q8N8R5 385 aa12.49□□□□□ -0.41
RPA1-206ENST00000573994 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
RPA1-206ENST00000573994 SIL1Q9H173 461 aa12.49□□□□□ -0.41
RPA1-206ENST00000573994 IQSEC3Q9UPP2 1182 aaPredicted RBP12.49□□□□□ -0.41
RPA1-206ENST00000573994 AOX1Q06278 1338 aa12.48□□□□□ -0.41
RPA1-206ENST00000573994 TRIM27P14373 513 aa12.48□□□□□ -0.41
RPA1-206ENST00000573994 CTCFP49711 727 aaPredicted RBP12.48□□□□□ -0.41
RPA1-206ENST00000573994 MAP2K1Q02750 393 aaPredicted RBP12.48□□□□□ -0.41
RPA1-206ENST00000573994 PTPN12Q05209 780 aaKnown RBP12.48□□□□□ -0.41
RPA1-206ENST00000573994 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
RPA1-206ENST00000573994 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
RPA1-206ENST00000573994 MOB2Q70IA6 237 aa12.48□□□□□ -0.41
RPA1-206ENST00000573994 VPS37DQ86XT2 251 aa12.48□□□□□ -0.41
RPA1-206ENST00000573994 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
RPA1-206ENST00000573994 ZIC5Q96T25 663 aa12.48□□□□□ -0.41
RPA1-206ENST00000573994 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
RPA1-206ENST00000573994 FAM205AQ6ZU69 1335 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 CLRN2A0PK11 232 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 EYA2O00167 538 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 PDE8BO95263 885 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 PUM3Q15397 648 aaKnown RBP12.47□□□□□ -0.41
RPA1-206ENST00000573994 DLGAP5Q15398 846 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 CFAP100Q494V2 611 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 MFSD14BQ5SR56 506 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 RGMBQ6NW40 437 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 TNS4Q8IZW8 715 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 TDRD7Q8NHU6 1098 aaKnown RBP12.47□□□□□ -0.41
RPA1-206ENST00000573994 ZBED3Q96IU2 234 aaPredicted RBP12.47□□□□□ -0.41
RPA1-206ENST00000573994 HHIPL1Q96JK4 782 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 TSKSQ9UJT2 592 aa12.47□□□□□ -0.41
RPA1-206ENST00000573994 PA2G4Q9UQ80 394 aaKnown RBP12.47□□□□□ -0.41
RPA1-206ENST00000573994 HSPA8P11142 646 aaKnown RBP12.46□□□□□ -0.41
RPA1-206ENST00000573994 BCAMP50895 628 aa12.46□□□□□ -0.41
RPA1-206ENST00000573994 ZNF157P51786 506 aaPredicted RBP12.46□□□□□ -0.41
RPA1-206ENST00000573994 LBX1P52954 281 aa12.46□□□□□ -0.41
RPA1-206ENST00000573994 GRIK5Q16478 980 aa12.46□□□□□ -0.41
RPA1-206ENST00000573994 INTS3Q68E01 1043 aaKnown RBP12.46□□□□□ -0.41
RPA1-206ENST00000573994 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.41
RPA1-206ENST00000573994 FBXO33Q7Z6M2 555 aa12.46□□□□□ -0.41
RPA1-206ENST00000573994 APOBEC3FQ8IUX4 373 aaKnown RBP12.46□□□□□ -0.41
RPA1-206ENST00000573994 ARHGAP45Q92619 1136 aa12.46□□□□□ -0.41
RPA1-206ENST00000573994 ZBED9Q6R2W3 1325 aa12.45□□□□□ -0.42
RPA1-206ENST00000573994 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
RPA1-206ENST00000573994 FRAT2O75474 233 aaPredicted RBP12.45□□□□□ -0.42
RPA1-206ENST00000573994 FGFR2P21802 821 aa12.45□□□□□ -0.42
RPA1-206ENST00000573994 MAP2K2P36507 400 aa12.45□□□□□ -0.42
RPA1-206ENST00000573994 RBM5P52756 815 aaKnown RBP eCLIP12.45□□□□□ -0.42
RPA1-206ENST00000573994 FKBP1AP62942 108 aaKnown RBP12.45□□□□□ -0.42
RPA1-206ENST00000573994 TTLL12Q14166 644 aaPredicted RBP12.45□□□□□ -0.42
RPA1-206ENST00000573994 CAVIN4Q5BKX8 364 aa12.45□□□□□ -0.42
RPA1-206ENST00000573994 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
RPA1-206ENST00000573994 BEGAINQ9BUH8 593 aa12.45□□□□□ -0.42
RPA1-206ENST00000573994 VEZTQ9HBM0 779 aa12.45□□□□□ -0.42
RPA1-206ENST00000573994 TTF2Q9UNY4 1162 aaKnown RBP12.45□□□□□ -0.42
RPA1-206ENST00000573994 PAPPA2Q9BXP8 1791 aa12.45□□□□□ -0.42
RPA1-206ENST00000573994 FAM155AB1AL88 458 aaPredicted RBP12.44□□□□□ -0.42
RPA1-206ENST00000573994 UBE2Q2LH0YL09 131 aa12.44□□□□□ -0.42
RPA1-206ENST00000573994 GNAI3P08754 354 aa12.44□□□□□ -0.42
RPA1-206ENST00000573994 IFIT1P09914 478 aaKnown RBP12.44□□□□□ -0.42
RPA1-206ENST00000573994 SLC5A1P13866 664 aa12.44□□□□□ -0.42
RPA1-206ENST00000573994 NOGQ13253 232 aa12.44□□□□□ -0.42
RPA1-206ENST00000573994 PRKG1Q13976 671 aa12.44□□□□□ -0.42
RPA1-206ENST00000573994 TMEM57Q8N5G2 664 aa12.44□□□□□ -0.42
RPA1-206ENST00000573994 COL1A1P02452 1464 aaPredicted RBP12.44□□□□□ -0.42
RPA1-206ENST00000573994 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 SLC10A3P09131 477 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 ZKSCAN2Q63HK3 967 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 RASAL3Q86YV0 1011 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 MTMR14Q8NCE2 650 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 LPIN2Q92539 896 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 PRMT6Q96LA8 375 aaPredicted RBP12.43□□□□□ -0.42
RPA1-206ENST00000573994 DEFB129Q9H1M3 183 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 PRDM10Q9NQV6 1147 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 FZD1Q9UP38 647 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 POLR2AP24928 1970 aaKnown RBP12.43□□□□□ -0.42
RPA1-206ENST00000573994 SSC5DA1L4H1 1573 aa12.43□□□□□ -0.42
RPA1-206ENST00000573994 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
RPA1-206ENST00000573994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
RPA1-206ENST00000573994 MYO1BO43795 1136 aa12.42□□□□□ -0.42
RPA1-206ENST00000573994 CIAO1O76071 339 aa12.42□□□□□ -0.42
RPA1-206ENST00000573994 NF2P35240 595 aa12.42□□□□□ -0.42
RPA1-206ENST00000573994 FKBP1BP68106 108 aa12.42□□□□□ -0.42
RPA1-206ENST00000573994 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
RPA1-206ENST00000573994 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
RPA1-206ENST00000573994 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
RPA1-206ENST00000573994 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
RPA1-206ENST00000573994 CEP126Q9P2H0 1117 aa12.42□□□□□ -0.42
RPA1-206ENST00000573994 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
RPA1-206ENST00000573994 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms