RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 XAGE2Q96GT9 111 aa13.39□□□□□ -0.27
LYRM1-210ENST00000568820 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
LYRM1-210ENST00000568820 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
LYRM1-210ENST00000568820 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
LYRM1-210ENST00000568820 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
LYRM1-210ENST00000568820 GOLIM4O00461 696 aa13.38□□□□□ -0.27
LYRM1-210ENST00000568820 ZFYP08048 801 aaPredicted RBP13.38□□□□□ -0.27
LYRM1-210ENST00000568820 KRT32Q14532 448 aa13.38□□□□□ -0.27
LYRM1-210ENST00000568820 CREB3L3Q68CJ9 461 aa13.38□□□□□ -0.27
LYRM1-210ENST00000568820 DDX46Q7L014 1031 aaKnown RBP13.38□□□□□ -0.27
LYRM1-210ENST00000568820 NLRP7Q8WX94 980 aa13.38□□□□□ -0.27
LYRM1-210ENST00000568820 EDC3Q96F86 508 aaKnown RBP13.38□□□□□ -0.27
LYRM1-210ENST00000568820 SPEF2Q9C093 1822 aa13.38□□□□□ -0.27
LYRM1-210ENST00000568820 TAF5LO75529 589 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 PDE8BO95263 885 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 CASTP20810 708 aaKnown RBP13.37□□□□□ -0.27
LYRM1-210ENST00000568820 SSFA2P28290 1259 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 DEKP35659 375 aaKnown RBP13.37□□□□□ -0.27
LYRM1-210ENST00000568820 VPS53Q5VIR6 699 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 CLEC17AQ6ZS10 378 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 ZNF512BQ96KM6 892 aaPredicted RBP13.37□□□□□ -0.27
LYRM1-210ENST00000568820 JAKMIP1Q96N16 626 aaKnown RBP13.37□□□□□ -0.27
LYRM1-210ENST00000568820 MPHOSPH8Q99549 860 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 RTL9Q8NET4 1388 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 AFF2P51816 1311 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 HSPA1LP34931 641 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 PTPN5P54829 565 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 AMHR2Q16671 573 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 TSGA10IPQ3SY00 556 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
LYRM1-210ENST00000568820 TTC14Q96N46 770 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
LYRM1-210ENST00000568820 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
LYRM1-210ENST00000568820 MYH3P11055 1940 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 SLC27A2O14975 620 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 TRIM66O15016 1216 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 NTSR2O95665 410 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 ANKRD1Q15327 319 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 PUM3Q15397 648 aaKnown RBP13.36□□□□□ -0.27
LYRM1-210ENST00000568820 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 USPL1Q5W0Q7 1092 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 RUFY3Q7L099 469 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 PDRG1Q9NUG6 133 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 RIC1Q4ADV7 1423 aa13.36□□□□□ -0.27
LYRM1-210ENST00000568820 RNF113AO15541 343 aaKnown RBP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 IGHMBP2P38935 993 aaKnown RBP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 SKOR2Q2VWA4 1001 aaPredicted RBP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 ZSCAN25Q6NSZ9 544 aa13.35□□□□□ -0.27
LYRM1-210ENST00000568820 ZNF589Q86UQ0 364 aaPredicted RBP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 LPIN2Q92539 896 aa13.35□□□□□ -0.27
LYRM1-210ENST00000568820 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
LYRM1-210ENST00000568820 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
LYRM1-210ENST00000568820 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
LYRM1-210ENST00000568820 NHSQ6T4R5 1651 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 AK2P54819 239 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 ZMYM1Q5SVZ6 1142 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 NYAP1Q6ZVC0 841 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 ZGPATQ8N5A5 531 aaKnown RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 VGLL2Q8N8G2 317 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 DSCC1Q9BVC3 393 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 TMUB1Q9BVT8 246 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 NYXQ9GZU5 481 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 ATRNO75882 1429 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 ZPR1O75312 459 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 CYP2E1P05181 493 aaPredicted RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 SLC5A1P13866 664 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 ADORA1P30542 326 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 PPP4CP60510 307 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 BLOC1S2Q6QNY1 142 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 ALDH8A1Q9H2A2 487 aaPredicted RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
LYRM1-210ENST00000568820 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
LYRM1-210ENST00000568820 RPAP1Q9BWH6 1393 aaPredicted RBP13.33□□□□□ -0.28
LYRM1-210ENST00000568820 RNF40O75150 1001 aa13.33□□□□□ -0.28
LYRM1-210ENST00000568820 HMGB1P09429 215 aaKnown RBP13.33□□□□□ -0.28
LYRM1-210ENST00000568820 CLCN1P35523 988 aa13.33□□□□□ -0.28
LYRM1-210ENST00000568820 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.28
LYRM1-210ENST00000568820 LRP5O75197 1615 aa13.32□□□□□ -0.28
LYRM1-210ENST00000568820 PDIA4P13667 645 aaKnown RBP13.32□□□□□ -0.28
LYRM1-210ENST00000568820 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
LYRM1-210ENST00000568820 ADCK5Q3MIX3 580 aa13.32□□□□□ -0.28
LYRM1-210ENST00000568820 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
LYRM1-210ENST00000568820 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
LYRM1-210ENST00000568820 TRAK2O60296 914 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 FGFR2P21802 821 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms