RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NAPBQ9H115 298 aa8.38□□□□□ -1.07
SMG1-215ENST00000568239 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 PRKAB2O43741 272 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 TDO2P48775 406 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 TRDNQ13061 729 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 RALYLQ86SE5 291 aaKnown RBP8.37□□□□□ -1.07
SMG1-215ENST00000568239 LCORLQ8N3X6 602 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 ANO8Q9HCE9 1232 aaPredicted RBP8.37□□□□□ -1.07
SMG1-215ENST00000568239 LEMD3Q9Y2U8 911 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 SLC4A4Q9Y6R1 1079 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 A0A1B0GUL6 1792 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 BBOX1O75936 387 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 NAA16Q6N069 864 aaPredicted RBP8.37□□□□□ -1.07
SMG1-215ENST00000568239 DEFB132Q7Z7B7 95 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 ADGRA1Q86SQ6 560 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 BRIP1Q9BX63 1249 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 STK32BQ9NY57 414 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 GGA1Q9UJY5 639 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 COL1A1P02452 1464 aaPredicted RBP8.37□□□□□ -1.07
SMG1-215ENST00000568239 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
SMG1-215ENST00000568239 GOLGA6L22H0YM25 854 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 PRDX5P30044 214 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 MCTP1Q6DN14 999 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 IFNL3Q8IZI9 196 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMG1-215ENST00000568239 NACAP1Q9BZK3 213 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 TOMM22Q9NS69 142 aa8.37□□□□□ -1.07
SMG1-215ENST00000568239 MAGEB6P1A0A0J9YX57 407 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 DDX11L8A8MPP1 907 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 SEMA3EO15041 775 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 GJB2P29033 226 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 SLC15A2Q16348 729 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 ZNF804AQ7Z570 1209 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 NCOA7Q8NI08 942 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 SDR42E1Q8WUS8 393 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 CHAMP1Q96JM3 812 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 PPEF1O14829 653 aaPredicted RBP8.36□□□□□ -1.07
SMG1-215ENST00000568239 RIMBP2O15034 1052 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
SMG1-215ENST00000568239 OLFM4Q6UX06 510 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 DZIP1Q86YF9 867 aaKnown RBP8.36□□□□□ -1.07
SMG1-215ENST00000568239 CAMKK2Q96RR4 588 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 GZF1Q9H116 711 aaPredicted RBP8.36□□□□□ -1.07
SMG1-215ENST00000568239 TMX4Q9H1E5 349 aaPredicted RBP8.36□□□□□ -1.07
SMG1-215ENST00000568239 ZDHHC9Q9Y397 364 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 MYH13Q9UKX3 1938 aa8.36□□□□□ -1.07
SMG1-215ENST00000568239 LAMA4Q16363 1823 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 MINDY4BA8MYZ0 360 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 ATP2B4P23634 1241 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 PDE6BP35913 854 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
SMG1-215ENST00000568239 CCT2P78371 535 aaKnown RBP8.35□□□□□ -1.07
SMG1-215ENST00000568239 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 RRP12Q5JTH9 1297 aaKnown RBP8.35□□□□□ -1.07
SMG1-215ENST00000568239 CRAMP1Q96RY5 1269 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 INCENPQ9NQS7 918 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 AATFQ9NY61 560 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG1-215ENST00000568239 ZNF219Q9P2Y4 722 aaPredicted RBP8.35□□□□□ -1.07
SMG1-215ENST00000568239 DOCK2Q92608 1830 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 GSG1L2A8MUP6 293 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 TRAK2O60296 914 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 PPFIA3O75145 1194 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 SRGNP10124 158 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 GNAT2P19087 354 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 HOXA10P31260 410 aaPredicted RBP8.35□□□□□ -1.07
SMG1-215ENST00000568239 MCM5P33992 734 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 BAG6P46379 1132 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 MECOMQ03112 1051 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 ST3GAL1Q11201 340 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 EPB41L4AQ9HCS5 686 aaPredicted RBP8.35□□□□□ -1.07
SMG1-215ENST00000568239 GPHNQ9NQX3 736 aaPredicted RBP8.35□□□□□ -1.07
SMG1-215ENST00000568239 POLLQ9UGP5 575 aa8.35□□□□□ -1.07
SMG1-215ENST00000568239 TNS1Q9HBL0 1735 aaKnown RBP8.35□□□□□ -1.07
SMG1-215ENST00000568239 VPS37CA5D8V6 355 aaPredicted RBP8.34□□□□□ -1.07
SMG1-215ENST00000568239 B4E1Z4 1266 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 PRC1O43663 620 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 SYT1P21579 422 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 EXOSC10Q01780 885 aaKnown RBP8.34□□□□□ -1.07
SMG1-215ENST00000568239 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 NSUN4Q96CB9 384 aaKnown RBP8.34□□□□□ -1.07
SMG1-215ENST00000568239 ALDH8A1Q9H2A2 487 aaPredicted RBP8.34□□□□□ -1.07
SMG1-215ENST00000568239 WDR33Q9C0J8 1336 aaKnown RBP8.34□□□□□ -1.07
SMG1-215ENST00000568239 STX6O43752 255 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 BRD1O95696 1058 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 LDHBP07195 334 aaKnown RBP8.34□□□□□ -1.07
SMG1-215ENST00000568239 NPR1P16066 1061 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 ALDH1B1P30837 517 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 RAB11FIP4Q86YS3 637 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 TBC1D16Q8TBP0 767 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 PDGFDQ9GZP0 370 aaPredicted RBP8.34□□□□□ -1.07
SMG1-215ENST00000568239 CD209Q9NNX6 404 aa8.34□□□□□ -1.07
SMG1-215ENST00000568239 KLRG2A4D1S0 409 aaPredicted RBP8.34□□□□□ -1.08
SMG1-215ENST00000568239 G3V3G9 751 aa8.34□□□□□ -1.08
SMG1-215ENST00000568239 DCAF8Q5TAQ9 597 aa8.34□□□□□ -1.08
SMG1-215ENST00000568239 LARP1BQ659C4 914 aaKnown RBP8.34□□□□□ -1.08
SMG1-215ENST00000568239 WDR66Q8TBY9 1149 aa8.34□□□□□ -1.08
SMG1-215ENST00000568239 ZNF384Q8TF68 577 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms