RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 FKTNO75072 461 aa23.25■■□□□ 1.31
LINC01238-205ENST00000567549 UBTFL1P0CB47 393 aaPredicted RBP23.25■■□□□ 1.31
LINC01238-205ENST00000567549 SLC5A1P13866 664 aa23.25■■□□□ 1.31
LINC01238-205ENST00000567549 CRKP46108 304 aa23.25■■□□□ 1.31
LINC01238-205ENST00000567549 MRIQ9BWK5 157 aa23.25■■□□□ 1.31
LINC01238-205ENST00000567549 API5Q9BZZ5 524 aaKnown RBP23.25■■□□□ 1.31
LINC01238-205ENST00000567549 CHAF1AQ13111 956 aaPredicted RBP23.24■■□□□ 1.31
LINC01238-205ENST00000567549 LRRC24Q50LG9 513 aa23.24■■□□□ 1.31
LINC01238-205ENST00000567549 WNK4Q96J92 1243 aa23.24■■□□□ 1.31
LINC01238-205ENST00000567549 NBPF12Q5TAG4 269 aaPredicted RBP23.23■■□□□ 1.31
LINC01238-205ENST00000567549 TDRD3Q9H7E2 651 aaKnown RBP23.23■■□□□ 1.31
LINC01238-205ENST00000567549 GNL3LQ9NVN8 582 aaKnown RBP23.23■■□□□ 1.31
LINC01238-205ENST00000567549 CCER2I3L3R5 266 aa23.22■■□□□ 1.31
LINC01238-205ENST00000567549 EYA2O00167 538 aa23.22■■□□□ 1.31
LINC01238-205ENST00000567549 WDHD1O75717 1129 aaPredicted RBP23.22■■□□□ 1.31
LINC01238-205ENST00000567549 IFNL1Q8IU54 200 aa23.22■■□□□ 1.31
LINC01238-205ENST00000567549 VGLL2Q8N8G2 317 aa23.22■■□□□ 1.31
LINC01238-205ENST00000567549 WDR66Q8TBY9 1149 aa23.22■■□□□ 1.31
LINC01238-205ENST00000567549 LPIN2Q92539 896 aa23.22■■□□□ 1.31
LINC01238-205ENST00000567549 LAMB1P07942 1786 aa23.22■■□□□ 1.31
LINC01238-205ENST00000567549 PCDHAC2Q9Y5I4 1007 aa23.21■■□□□ 1.31
LINC01238-205ENST00000567549 CSADQ9Y600 493 aa23.21■■□□□ 1.31
LINC01238-205ENST00000567549 SSC5DA1L4H1 1573 aa23.21■■□□□ 1.31
LINC01238-205ENST00000567549 MYH13Q9UKX3 1938 aa23.2■■□□□ 1.3
LINC01238-205ENST00000567549 USP2O75604 605 aaPredicted RBP23.2■■□□□ 1.3
LINC01238-205ENST00000567549 FKBP1CQ5VVH2 108 aa23.2■■□□□ 1.3
LINC01238-205ENST00000567549 FBXO46Q6PJ61 603 aaPredicted RBP23.2■■□□□ 1.3
LINC01238-205ENST00000567549 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.2■■□□□ 1.3
LINC01238-205ENST00000567549 IQSEC3Q9UPP2 1182 aaPredicted RBP23.2■■□□□ 1.3
LINC01238-205ENST00000567549 TCP10L2B9ZVM9 353 aa23.19■■□□□ 1.3
LINC01238-205ENST00000567549 CIAO1O76071 339 aa23.19■■□□□ 1.3
LINC01238-205ENST00000567549 ARHGEF6Q15052 776 aa23.19■■□□□ 1.3
LINC01238-205ENST00000567549 ZDHHC15Q96MV8 337 aa23.19■■□□□ 1.3
LINC01238-205ENST00000567549 CEP126Q9P2H0 1117 aa23.19■■□□□ 1.3
LINC01238-205ENST00000567549 BCAMP50895 628 aa23.18■■□□□ 1.3
LINC01238-205ENST00000567549 HHIPL2Q6UWX4 724 aa23.18■■□□□ 1.3
LINC01238-205ENST00000567549 FAM83AQ86UY5 434 aa23.18■■□□□ 1.3
LINC01238-205ENST00000567549 TRMT2AQ8IZ69 625 aaKnown RBP23.18■■□□□ 1.3
LINC01238-205ENST00000567549 CLMNQ96JQ2 1002 aa23.18■■□□□ 1.3
LINC01238-205ENST00000567549 HPS5Q9UPZ3 1129 aa23.18■■□□□ 1.3
LINC01238-205ENST00000567549 FGFR2P21802 821 aa23.17■■□□□ 1.3
LINC01238-205ENST00000567549 DCAF15Q66K64 600 aa23.17■■□□□ 1.3
LINC01238-205ENST00000567549 KLHDC4Q8TBB5 520 aa23.17■■□□□ 1.3
LINC01238-205ENST00000567549 ERO1AQ96HE7 468 aa23.17■■□□□ 1.3
LINC01238-205ENST00000567549 FZD1Q9UP38 647 aa23.17■■□□□ 1.3
LINC01238-205ENST00000567549 SEMA3EO15041 775 aa23.16■■□□□ 1.3
LINC01238-205ENST00000567549 GTF2A2P52657 109 aa23.16■■□□□ 1.3
LINC01238-205ENST00000567549 MAP3K9P80192 1104 aa23.16■■□□□ 1.3
LINC01238-205ENST00000567549 CDCA7LQ96GN5 454 aa23.16■■□□□ 1.3
LINC01238-205ENST00000567549 NOB1Q9ULX3 412 aaKnown RBP23.16■■□□□ 1.3
LINC01238-205ENST00000567549 IPO8O15397 1037 aaKnown RBP23.15■■□□□ 1.3
LINC01238-205ENST00000567549 IL15P40933 162 aaPredicted RBP23.15■■□□□ 1.3
LINC01238-205ENST00000567549 ZGPATQ8N5A5 531 aaKnown RBP23.15■■□□□ 1.3
LINC01238-205ENST00000567549 ARHGAP45Q92619 1136 aa23.15■■□□□ 1.3
LINC01238-205ENST00000567549 OPTNQ96CV9 577 aa23.15■■□□□ 1.3
LINC01238-205ENST00000567549 GNAI3P08754 354 aa23.14■■□□□ 1.29
LINC01238-205ENST00000567549 RFX5P48382 616 aaPredicted RBP23.14■■□□□ 1.29
LINC01238-205ENST00000567549 ATP2B3Q16720 1220 aa23.14■■□□□ 1.29
LINC01238-205ENST00000567549 TMEM39BQ9GZU3 492 aa23.14■■□□□ 1.29
LINC01238-205ENST00000567549 ELP3Q9H9T3 547 aa23.14■■□□□ 1.29
LINC01238-205ENST00000567549 RPAP1Q9BWH6 1393 aaPredicted RBP23.14■■□□□ 1.29
LINC01238-205ENST00000567549 TESPA1A2RU30 521 aaPredicted RBP23.13■■□□□ 1.29
LINC01238-205ENST00000567549 SOX10P56693 466 aa23.13■■□□□ 1.29
LINC01238-205ENST00000567549 TEPSINQ96N21 525 aa23.13■■□□□ 1.29
LINC01238-205ENST00000567549 DENND2AQ9ULE3 1009 aa23.13■■□□□ 1.29
LINC01238-205ENST00000567549 OTOFQ9HC10 1997 aa23.12■■□□□ 1.29
LINC01238-205ENST00000567549 IGF2BP3O00425 579 aaKnown RBP eCLIP23.12■■□□□ 1.29
LINC01238-205ENST00000567549 AOX1Q06278 1338 aa23.11■■□□□ 1.29
LINC01238-205ENST00000567549 LDHBP07195 334 aaKnown RBP23.11■■□□□ 1.29
LINC01238-205ENST00000567549 VGLL4Q14135 290 aa23.11■■□□□ 1.29
LINC01238-205ENST00000567549 INTS3Q68E01 1043 aaKnown RBP23.11■■□□□ 1.29
LINC01238-205ENST00000567549 SLF2Q8IX21 1173 aa23.11■■□□□ 1.29
LINC01238-205ENST00000567549 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.11■■□□□ 1.29
LINC01238-205ENST00000567549 SIL1Q9H173 461 aa23.11■■□□□ 1.29
LINC01238-205ENST00000567549 TRIM17Q9Y577 477 aa23.11■■□□□ 1.29
LINC01238-205ENST00000567549 ZBTB22O15209 634 aa23.1■■□□□ 1.29
LINC01238-205ENST00000567549 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.1■■□□□ 1.29
LINC01238-205ENST00000567549 ATG9AQ7Z3C6 839 aa23.1■■□□□ 1.29
LINC01238-205ENST00000567549 ERO1BQ86YB8 467 aa23.1■■□□□ 1.29
LINC01238-205ENST00000567549 ZFYVE28Q9HCC9 887 aa23.1■■□□□ 1.29
LINC01238-205ENST00000567549 ZCCHC17Q9NP64 241 aaKnown RBP23.1■■□□□ 1.29
LINC01238-205ENST00000567549 AKAP2Q9Y2D5 859 aa23.1■■□□□ 1.29
LINC01238-205ENST00000567549 SALL1Q9NSC2 1324 aa23.09■■□□□ 1.29
LINC01238-205ENST00000567549 CETPP11597 493 aa23.09■■□□□ 1.29
LINC01238-205ENST00000567549 RARSP54136 660 aaKnown RBP23.09■■□□□ 1.29
LINC01238-205ENST00000567549 SP3Q02447 781 aa23.09■■□□□ 1.29
LINC01238-205ENST00000567549 CRHR2Q13324 411 aa23.09■■□□□ 1.29
LINC01238-205ENST00000567549 APOBEC3HQ6NTF7 200 aaKnown RBP23.09■■□□□ 1.29
LINC01238-205ENST00000567549 WRNIP1Q96S55 665 aa23.09■■□□□ 1.29
LINC01238-205ENST00000567549 ZNF341Q9BYN7 854 aa23.09■■□□□ 1.29
LINC01238-205ENST00000567549 COPRSQ9NQ92 184 aa23.09■■□□□ 1.29
LINC01238-205ENST00000567549 LRRFIP2Q9Y608 721 aaKnown RBP23.09■■□□□ 1.29
LINC01238-205ENST00000567549 CCL15-CCL14A0A0B4J2E2 113 aa23.08■■□□□ 1.29
LINC01238-205ENST00000567549 SPDYE5A6NIY4 337 aa23.08■■□□□ 1.29
LINC01238-205ENST00000567549 CCL15Q16663 113 aa23.08■■□□□ 1.29
LINC01238-205ENST00000567549 FAM151AQ8WW52 585 aa23.08■■□□□ 1.29
LINC01238-205ENST00000567549 OTUD5Q96G74 571 aa23.08■■□□□ 1.29
LINC01238-205ENST00000567549 GJA5P36382 358 aa23.07■■□□□ 1.28
LINC01238-205ENST00000567549 SNAPC2Q13487 334 aa23.07■■□□□ 1.28
LINC01238-205ENST00000567549 TAF1CQ15572 869 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms