RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 TEPSINQ96N21 525 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 PTPN18Q99952 460 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 RCAN3Q9UKA8 241 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 RIPOR2Q9Y4F9 1068 aa7.35□□□□□ -1.23
USP3-212ENST00000559276 RBBP6Q7Z6E9 1792 aaKnown RBP7.34□□□□□ -1.23
USP3-212ENST00000559276 PLIN1O60240 522 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 FKTNO75072 461 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 SREBF2Q12772 1141 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 UBE4AQ14139 1066 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 RASA3Q14644 834 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 PKN2Q16513 984 aaKnown RBP7.34□□□□□ -1.23
USP3-212ENST00000559276 CCDC57Q2TAC2 916 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 SPDYE2Q495Y8 402 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 FBXO46Q6PJ61 603 aaPredicted RBP7.34□□□□□ -1.23
USP3-212ENST00000559276 FBXO33Q7Z6M2 555 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 MRPL50Q8N5N7 158 aaKnown RBP7.34□□□□□ -1.23
USP3-212ENST00000559276 ZNF70Q9UC06 446 aaPredicted RBP7.34□□□□□ -1.23
USP3-212ENST00000559276 CHMP3Q9Y3E7 222 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 PPP2R3BQ9Y5P8 575 aa7.34□□□□□ -1.23
USP3-212ENST00000559276 TESPA1A2RU30 521 aaPredicted RBP7.33□□□□□ -1.24
USP3-212ENST00000559276 MANSC4A6NHS7 340 aaPredicted RBP7.33□□□□□ -1.24
USP3-212ENST00000559276 UNCXA6NJT0 531 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 ZBTB48P10074 688 aaPredicted RBP7.33□□□□□ -1.24
USP3-212ENST00000559276 LRRC24Q50LG9 513 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 MFSD14BQ5SR56 506 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 SLC4A10Q6U841 1118 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.33□□□□□ -1.24
USP3-212ENST00000559276 KLHDC4Q8TBB5 520 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 CNKSR2Q8WXI2 1034 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 SLC10A4Q96EP9 437 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 MS4A4AQ96JQ5 239 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 BACH2Q9BYV9 841 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 SRCIN1Q9C0H9 1055 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 BICC1Q9H694 974 aaKnown RBP7.33□□□□□ -1.24
USP3-212ENST00000559276 TDRD3Q9H7E2 651 aaKnown RBP7.33□□□□□ -1.24
USP3-212ENST00000559276 VEZTQ9HBM0 779 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 CNNM1Q9NRU3 951 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
USP3-212ENST00000559276 ZSWIM8A7E2V4 1837 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 PDE4DIPQ5VU43 2346 aa7.33□□□□□ -1.24
USP3-212ENST00000559276 PPP1R12BO60237 982 aaPredicted RBP7.32□□□□□ -1.24
USP3-212ENST00000559276 ALDH1A1P00352 501 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 HIBADHP31937 336 aaKnown RBP7.32□□□□□ -1.24
USP3-212ENST00000559276 RFX5P48382 616 aaPredicted RBP7.32□□□□□ -1.24
USP3-212ENST00000559276 INHBEP58166 350 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 CRHR2Q13324 411 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 SUPT20HL1Q3ZLR7 823 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 OTOP1Q7RTM1 612 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 DZIP1LQ8IYY4 767 aaKnown RBP7.32□□□□□ -1.24
USP3-212ENST00000559276 TMEM39BQ9GZU3 492 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 USP44Q9H0E7 712 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 FOXD4L1Q9NU39 408 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 SERPINA10Q9UK55 444 aa7.32□□□□□ -1.24
USP3-212ENST00000559276 TTF2Q9UNY4 1162 aaKnown RBP7.32□□□□□ -1.24
USP3-212ENST00000559276 IQSEC3Q9UPP2 1182 aaPredicted RBP7.32□□□□□ -1.24
USP3-212ENST00000559276 MROH5Q6ZUA9 1318 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 POTEFA5A3E0 1075 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 TCP10L2B9ZVM9 353 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 MYO1BO43795 1136 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 FGFR2P21802 821 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 PDE4AP27815 886 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 CRKP46108 304 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 IREB2P48200 963 aaKnown RBP7.31□□□□□ -1.24
USP3-212ENST00000559276 BCAMP50895 628 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 RBM5P52756 815 aaKnown RBP eCLIP7.31□□□□□ -1.24
USP3-212ENST00000559276 CACNB3P54284 484 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 NBR1Q14596 966 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 TAF7LQ5H9L4 462 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 ANKRD13AQ8IZ07 590 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.31□□□□□ -1.24
USP3-212ENST00000559276 BRI3BPQ8WY22 251 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 SSH1Q8WYL5 1049 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 OPTNQ96CV9 577 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 ELP3Q9H9T3 547 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
USP3-212ENST00000559276 MYH13Q9UKX3 1938 aa7.31□□□□□ -1.24
USP3-212ENST00000559276 PDE8BO95263 885 aa7.3□□□□□ -1.24
USP3-212ENST00000559276 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
USP3-212ENST00000559276 VGLL4Q14135 290 aa7.3□□□□□ -1.24
USP3-212ENST00000559276 PRPF38BQ5VTL8 546 aaKnown RBP7.3□□□□□ -1.24
USP3-212ENST00000559276 APOBEC3HQ6NTF7 200 aaKnown RBP7.3□□□□□ -1.24
USP3-212ENST00000559276 FAM43AQ8N2R8 423 aa7.3□□□□□ -1.24
USP3-212ENST00000559276 CD99L2Q8TCZ2 262 aa7.3□□□□□ -1.24
USP3-212ENST00000559276 PTPN22Q9Y2R2 807 aa7.3□□□□□ -1.24
USP3-212ENST00000559276 TRIM17Q9Y577 477 aa7.3□□□□□ -1.24
USP3-212ENST00000559276 SNCAIPQ9Y6H5 919 aa7.3□□□□□ -1.24
USP3-212ENST00000559276 CHAF1AQ13111 956 aaPredicted RBP7.29□□□□□ -1.24
USP3-212ENST00000559276 METTL24Q5JXM2 366 aa7.29□□□□□ -1.24
USP3-212ENST00000559276 CENPQQ7L2Z9 268 aaPredicted RBP7.29□□□□□ -1.24
USP3-212ENST00000559276 ATG9AQ7Z3C6 839 aa7.29□□□□□ -1.24
USP3-212ENST00000559276 TRMT2AQ8IZ69 625 aaKnown RBP7.29□□□□□ -1.24
USP3-212ENST00000559276 ARMC5Q96C12 935 aa7.29□□□□□ -1.24
USP3-212ENST00000559276 CDCA7LQ96GN5 454 aa7.29□□□□□ -1.24
USP3-212ENST00000559276 ZDHHC15Q96MV8 337 aa7.29□□□□□ -1.24
USP3-212ENST00000559276 MRIQ9BWK5 157 aa7.29□□□□□ -1.24
USP3-212ENST00000559276 PTPRCP08575 1304 aa7.28□□□□□ -1.24
USP3-212ENST00000559276 KIF16BQ96L93 1317 aa7.28□□□□□ -1.24
USP3-212ENST00000559276 SPDYE5A6NIY4 337 aa7.28□□□□□ -1.24
USP3-212ENST00000559276 MAP3K9P80192 1104 aa7.28□□□□□ -1.24
USP3-212ENST00000559276 SP3Q02447 781 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms