RNA–Protein interactions for RNA: ENST00000521129.1

MCPH1-204, Transcript of microcephalin 1, humanhuman

TSL 2

Gene MCPH1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-204ENST00000521129 FRAT1Q92837 279 aaPredicted RBP13.98□□□□□ -0.17
MCPH1-204ENST00000521129 WNK4Q96J92 1243 aa13.98□□□□□ -0.17
MCPH1-204ENST00000521129 CLMNQ96JQ2 1002 aa13.98□□□□□ -0.17
MCPH1-204ENST00000521129 TTF2Q9UNY4 1162 aaKnown RBP13.98□□□□□ -0.17
MCPH1-204ENST00000521129 USP2O75604 605 aaPredicted RBP13.97□□□□□ -0.17
MCPH1-204ENST00000521129 IREB2P48200 963 aaKnown RBP13.97□□□□□ -0.17
MCPH1-204ENST00000521129 IFNL1Q8IU54 200 aa13.97□□□□□ -0.17
MCPH1-204ENST00000521129 VGLL2Q8N8G2 317 aa13.97□□□□□ -0.17
MCPH1-204ENST00000521129 R3HDMLQ9H3Y0 253 aa13.97□□□□□ -0.17
MCPH1-204ENST00000521129 ZNF70Q9UC06 446 aaPredicted RBP13.97□□□□□ -0.17
MCPH1-204ENST00000521129 OTOFQ9HC10 1997 aa13.96□□□□□ -0.17
MCPH1-204ENST00000521129 IPO8O15397 1037 aaKnown RBP13.96□□□□□ -0.17
MCPH1-204ENST00000521129 HDLBPQ00341 1268 aaKnown RBP13.96□□□□□ -0.17
MCPH1-204ENST00000521129 FBXO46Q6PJ61 603 aaPredicted RBP13.96□□□□□ -0.17
MCPH1-204ENST00000521129 DZIP1LQ8IYY4 767 aaKnown RBP13.96□□□□□ -0.17
MCPH1-204ENST00000521129 ANKRD13AQ8IZ07 590 aa13.96□□□□□ -0.17
MCPH1-204ENST00000521129 TBC1D22AQ8WUA7 517 aa13.96□□□□□ -0.17
MCPH1-204ENST00000521129 API5Q9BZZ5 524 aaKnown RBP13.96□□□□□ -0.17
MCPH1-204ENST00000521129 IGF2BP3O00425 579 aaKnown RBP eCLIP13.95□□□□□ -0.18
MCPH1-204ENST00000521129 PDE8BO95263 885 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 SLC34A2O95436 690 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 CRKP46108 304 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 LRRC24Q50LG9 513 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 CAVIN4Q5BKX8 364 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 ZKSCAN2Q63HK3 967 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 VPS37DQ86XT2 251 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 ARHGAP45Q92619 1136 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 TEPSINQ96N21 525 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 USP44Q9H0E7 712 aa13.95□□□□□ -0.18
MCPH1-204ENST00000521129 TDRD3Q9H7E2 651 aaKnown RBP13.95□□□□□ -0.18
MCPH1-204ENST00000521129 CENPFP49454 3210 aa13.94□□□□□ -0.18
MCPH1-204ENST00000521129 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
MCPH1-204ENST00000521129 GJA5P36382 358 aa13.94□□□□□ -0.18
MCPH1-204ENST00000521129 MRIQ9BWK5 157 aa13.94□□□□□ -0.18
MCPH1-204ENST00000521129 TNNI2P48788 182 aa13.93□□□□□ -0.18
MCPH1-204ENST00000521129 GRIK5Q16478 980 aa13.93□□□□□ -0.18
MCPH1-204ENST00000521129 OTUD7BQ6GQQ9 843 aa13.93□□□□□ -0.18
MCPH1-204ENST00000521129 ATF7IPQ6VMQ6 1270 aa13.93□□□□□ -0.18
MCPH1-204ENST00000521129 SUGT1Q9Y2Z0 365 aa13.93□□□□□ -0.18
MCPH1-204ENST00000521129 TRIM27P14373 513 aa13.92□□□□□ -0.18
MCPH1-204ENST00000521129 FGFR2P21802 821 aa13.92□□□□□ -0.18
MCPH1-204ENST00000521129 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
MCPH1-204ENST00000521129 PUM3Q15397 648 aaKnown RBP13.92□□□□□ -0.18
MCPH1-204ENST00000521129 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
MCPH1-204ENST00000521129 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.92□□□□□ -0.18
MCPH1-204ENST00000521129 KLHDC4Q8TBB5 520 aa13.92□□□□□ -0.18
MCPH1-204ENST00000521129 TEKT1Q969V4 418 aa13.92□□□□□ -0.18
MCPH1-204ENST00000521129 ZDHHC15Q96MV8 337 aa13.92□□□□□ -0.18
MCPH1-204ENST00000521129 TMEM39BQ9GZU3 492 aa13.92□□□□□ -0.18
MCPH1-204ENST00000521129 IQSEC3Q9UPP2 1182 aaPredicted RBP13.92□□□□□ -0.18
MCPH1-204ENST00000521129 MAST3O60307 1309 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 TCP10L2B9ZVM9 353 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 FRAT2O75474 233 aaPredicted RBP13.91□□□□□ -0.18
MCPH1-204ENST00000521129 IFIT1P09914 478 aaKnown RBP13.91□□□□□ -0.18
MCPH1-204ENST00000521129 RFX5P48382 616 aaPredicted RBP13.91□□□□□ -0.18
MCPH1-204ENST00000521129 BCAMP50895 628 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 FKBP1CQ5VVH2 108 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.91□□□□□ -0.18
MCPH1-204ENST00000521129 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.91□□□□□ -0.18
MCPH1-204ENST00000521129 CLUAP1Q96AJ1 413 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 OPTNQ96CV9 577 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 MS4A4AQ96JQ5 239 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 PTPN18Q99952 460 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 ELP3Q9H9T3 547 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.91□□□□□ -0.18
MCPH1-204ENST00000521129 TNNQ9UQP3 1299 aa13.91□□□□□ -0.18
MCPH1-204ENST00000521129 MYH13Q9UKX3 1938 aa13.9□□□□□ -0.18
MCPH1-204ENST00000521129 MKI67P46013 3256 aaKnown RBP13.9□□□□□ -0.18
MCPH1-204ENST00000521129 EYA2O00167 538 aa13.9□□□□□ -0.18
MCPH1-204ENST00000521129 MAP3K9P80192 1104 aa13.9□□□□□ -0.18
MCPH1-204ENST00000521129 CRHR2Q13324 411 aa13.9□□□□□ -0.18
MCPH1-204ENST00000521129 VGLL4Q14135 290 aa13.9□□□□□ -0.18
MCPH1-204ENST00000521129 OTOP1Q7RTM1 612 aa13.9□□□□□ -0.18
MCPH1-204ENST00000521129 FAM83AQ86UY5 434 aa13.9□□□□□ -0.18
MCPH1-204ENST00000521129 FTSJ3Q8IY81 847 aaKnown RBP13.9□□□□□ -0.18
MCPH1-204ENST00000521129 ERO1AQ96HE7 468 aa13.9□□□□□ -0.18
MCPH1-204ENST00000521129 KIAA0100Q14667 2235 aaKnown RBP13.9□□□□□ -0.18
MCPH1-204ENST00000521129 RPAP1Q9BWH6 1393 aaPredicted RBP13.89□□□□□ -0.19
MCPH1-204ENST00000521129 MS4A1P11836 297 aa13.89□□□□□ -0.19
MCPH1-204ENST00000521129 SLC5A1P13866 664 aa13.89□□□□□ -0.19
MCPH1-204ENST00000521129 APOBEC3HQ6NTF7 200 aaKnown RBP13.89□□□□□ -0.19
MCPH1-204ENST00000521129 HHIPL2Q6UWX4 724 aa13.89□□□□□ -0.19
MCPH1-204ENST00000521129 LPIN2Q92539 896 aa13.89□□□□□ -0.19
MCPH1-204ENST00000521129 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
MCPH1-204ENST00000521129 TRIM17Q9Y577 477 aa13.89□□□□□ -0.19
MCPH1-204ENST00000521129 CSADQ9Y600 493 aa13.89□□□□□ -0.19
MCPH1-204ENST00000521129 BRCA2P51587 3418 aa13.88□□□□□ -0.19
MCPH1-204ENST00000521129 GTF2A2P52657 109 aa13.88□□□□□ -0.19
MCPH1-204ENST00000521129 ATG9AQ7Z3C6 839 aa13.88□□□□□ -0.19
MCPH1-204ENST00000521129 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
MCPH1-204ENST00000521129 BRI3BPQ8WY22 251 aa13.88□□□□□ -0.19
MCPH1-204ENST00000521129 HOOK2Q96ED9 719 aa13.88□□□□□ -0.19
MCPH1-204ENST00000521129 TMOD2Q9NZR1 351 aa13.88□□□□□ -0.19
MCPH1-204ENST00000521129 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
MCPH1-204ENST00000521129 CIAO1O76071 339 aa13.87□□□□□ -0.19
MCPH1-204ENST00000521129 CACNB3P54284 484 aa13.87□□□□□ -0.19
MCPH1-204ENST00000521129 RRP1P56182 461 aaKnown RBP13.87□□□□□ -0.19
MCPH1-204ENST00000521129 SP3Q02447 781 aa13.87□□□□□ -0.19
MCPH1-204ENST00000521129 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms