RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	DEPDC7	Q96QD5	511 aa		5.05	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ZIM2	Q9NZV7	527 aa		5.05	□□□□□ -1.6
SLC38A9-223	ENST00000515629	MRVI1	Q9Y6F6	885 aa		5.05	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ABCC11	Q96J66	1382 aa		5.05	□□□□□ -1.6
SLC38A9-223	ENST00000515629	GLI3	P10071	1580 aa		5.05	□□□□□ -1.6
SLC38A9-223	ENST00000515629	BLM	P54132	1417 aa	Predicted RBP	5.05	□□□□□ -1.6
SLC38A9-223	ENST00000515629	POTEB2	H3BUK9	544 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	FIBP	O43427	364 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	HMMR	O75330	724 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	PRPF40A	O75400	957 aa	Known RBP	5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	CTH	P32929	405 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	RASA3	Q14644	834 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	HSP90AB3P	Q58FF7	597 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ANKRD42	Q8N9B4	389 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	TMC1	Q8TDI8	760 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ATRIP	Q8WXE1	791 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	TRIM55	Q9BYV6	548 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	TMX1	Q9H3N1	280 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ABCF2	Q9UG63	623 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	MARF1	Q9Y4F3	1742 aa	Known RBP	5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	TREH	O43280	583 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	PPFIA3	O75145	1194 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	MTA2	O94776	668 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	CASP2	P42575	452 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	CLK1	P49759	484 aa	Known RBP	5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	RAB27A	P51159	221 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	FMR1	Q06787	632 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	SWI5	Q1ZZU3	235 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	LARP1B	Q659C4	914 aa	Known RBP	5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	MSL1	Q68DK7	614 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	NYAP1	Q6ZVC0	841 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	KRT28	Q7Z3Y7	464 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	SEPT12	Q8IYM1	358 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ZNF654	Q8IZM8	581 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	C1orf216	Q8TAB5	229 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	FAM174A	Q8TBP5	190 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	HELQ	Q8TDG4	1101 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	KMT5A	Q9NQR1	393 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	CCDC144A	A2RUR9	1427 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	SPATA31E1	Q6ZUB1	1445 aa		5.04	□□□□□ -1.6
SLC38A9-223	ENST00000515629	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629		A0A1W2PRQ8	180 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	RPN1	P04843	607 aa	Known RBP	5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	IFIT2	P09913	472 aa	Known RBP	5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	EPHB1	P54762	984 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	KCNH2	Q12809	1159 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	OCLN	Q16625	522 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	SPECC1	Q5M775	1068 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	FAM83B	Q5T0W9	1011 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	NBPF6	Q5VWK0	638 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ALKBH2	Q6NS38	261 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	TMEM92	Q6UXU6	159 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ANKRD13D	Q6ZTN6	518 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	NBPF5P	Q86XG9	351 aa	Predicted RBP	5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	NDUFAF2	Q8N183	169 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	TTC8	Q8TAM2	541 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	NBPF4	Q96M43	638 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	CD248	Q9HCU0	757 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	ANKRD30B	Q9BXX2	1392 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	PIP5K1C	O60331	668 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	EIF4G2	P78344	907 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	FKBP4	Q02790	459 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	WASHC5	Q12768	1159 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	SPICE1	Q8N0Z3	855 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	CPXCR1	Q8N123	301 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	NELL1	Q92832	810 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	PIK3C2G	O75747	1445 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	YTHDC2	Q9H6S0	1430 aa	Known RBP	5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	USP32	Q8NFA0	1604 aa		5.03	□□□□□ -1.6
SLC38A9-223	ENST00000515629	SSB	P05455	408 aa	Known RBP eCLIP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	EPB42	P16452	691 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	MCL1	Q07820	350 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	ALF	Q53S48	1182 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	ARSH	Q5FYA8	562 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	IL31	Q6EBC2	164 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	LILRB2	Q8N423	598 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	PTCD2	Q8WV60	388 aa	Known RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	SKA1	Q96BD8	255 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	FBXO2	Q9UK22	296 aa	Predicted RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	BRWD3	Q6RI45	1802 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	FMN2	Q9NZ56	1722 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	TNS3	Q68CZ2	1445 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	NBN	O60934	754 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	SSR1	P43307	286 aa	Known RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	TNNT2	P45379	298 aa	Predicted RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	GJA8	P48165	433 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	SLC4A3	P48751	1232 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	NEK3	P51956	506 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	PSMC1	P62191	440 aa	Known RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	PAK2	Q13177	524 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	TUSC1	Q2TAM9	212 aa		5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	SMAD5	Q99717	465 aa	Known RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	SRA1	Q9HD15	236 aa	Known RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	CXXC1	Q9P0U4	656 aa	Predicted RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	NOB1	Q9ULX3	412 aa	Known RBP	5.02	□□□□□ -1.61
SLC38A9-223	ENST00000515629	PRPF3	O43395	683 aa	Known RBP	5.01	□□□□□ -1.61
SLC38A9-223	ENST00000515629	RRP9	O43818	475 aa	Known RBP	5.01	□□□□□ -1.61
SLC38A9-223	ENST00000515629	TCEA3	O75764	348 aa		5.01	□□□□□ -1.61
SLC38A9-223	ENST00000515629	SLC34A2	O95436	690 aa		5.01	□□□□□ -1.61

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