RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 MFSD14BQ5SR56 506 aa16.82■□□□□ 0.28
CLDND1-224ENST00000511667 APOBEC3FQ8IUX4 373 aaKnown RBP16.82■□□□□ 0.28
CLDND1-224ENST00000511667 LPIN2Q92539 896 aa16.82■□□□□ 0.28
CLDND1-224ENST00000511667 PRMT6Q96LA8 375 aaPredicted RBP16.82■□□□□ 0.28
CLDND1-224ENST00000511667 MRIQ9BWK5 157 aa16.82■□□□□ 0.28
CLDND1-224ENST00000511667 CFHR5Q9BXR6 569 aa16.82■□□□□ 0.28
CLDND1-224ENST00000511667 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
CLDND1-224ENST00000511667 HTTP42858 3142 aa16.82■□□□□ 0.28
CLDND1-224ENST00000511667 A0A0C4DFX4 3053 aa16.81■□□□□ 0.28
CLDND1-224ENST00000511667 IL15P40933 162 aaPredicted RBP16.81■□□□□ 0.28
CLDND1-224ENST00000511667 HDLBPQ00341 1268 aaKnown RBP16.81■□□□□ 0.28
CLDND1-224ENST00000511667 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
CLDND1-224ENST00000511667 GRIK5Q16478 980 aa16.81■□□□□ 0.28
CLDND1-224ENST00000511667 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
CLDND1-224ENST00000511667 ZKSCAN2Q63HK3 967 aa16.81■□□□□ 0.28
CLDND1-224ENST00000511667 SCAF8Q9UPN6 1271 aaKnown RBP16.81■□□□□ 0.28
CLDND1-224ENST00000511667 SSC5DA1L4H1 1573 aa16.81■□□□□ 0.28
CLDND1-224ENST00000511667 SREBF2Q12772 1141 aa16.8■□□□□ 0.28
CLDND1-224ENST00000511667 CAVIN4Q5BKX8 364 aa16.8■□□□□ 0.28
CLDND1-224ENST00000511667 TMEM57Q8N5G2 664 aa16.8■□□□□ 0.28
CLDND1-224ENST00000511667 TBC1D22AQ8WUA7 517 aa16.8■□□□□ 0.28
CLDND1-224ENST00000511667 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
CLDND1-224ENST00000511667 JAG2Q9Y219 1238 aa16.8■□□□□ 0.28
CLDND1-224ENST00000511667 SUGT1Q9Y2Z0 365 aa16.8■□□□□ 0.28
CLDND1-224ENST00000511667 TRIM17Q9Y577 477 aa16.8■□□□□ 0.28
CLDND1-224ENST00000511667 PPP2R3BQ9Y5P8 575 aa16.8■□□□□ 0.28
CLDND1-224ENST00000511667 IFIT1P09914 478 aaKnown RBP16.79■□□□□ 0.28
CLDND1-224ENST00000511667 MAP3K11Q16584 847 aa16.79■□□□□ 0.28
CLDND1-224ENST00000511667 LDLRAD1Q5T700 205 aa16.79■□□□□ 0.28
CLDND1-224ENST00000511667 RLBP1P12271 317 aa16.78■□□□□ 0.28
CLDND1-224ENST00000511667 SLC5A1P13866 664 aa16.78■□□□□ 0.28
CLDND1-224ENST00000511667 EN2P19622 333 aaPredicted RBP16.78■□□□□ 0.28
CLDND1-224ENST00000511667 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
CLDND1-224ENST00000511667 PRAMEF18Q5VWM3 479 aa16.78■□□□□ 0.28
CLDND1-224ENST00000511667 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
CLDND1-224ENST00000511667 DEFB129Q9H1M3 183 aa16.78■□□□□ 0.28
CLDND1-224ENST00000511667 CEP126Q9P2H0 1117 aa16.78■□□□□ 0.28
CLDND1-224ENST00000511667 LAMB1P07942 1786 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 F8W031 263 aaPredicted RBP16.77■□□□□ 0.28
CLDND1-224ENST00000511667 SRGAP3O43295 1099 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 GNAI2P04899 355 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 POLA2Q14181 598 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 ATP2B3Q16720 1220 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 MOB2Q70IA6 237 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 OTOP1Q7RTM1 612 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 SIL1Q9H173 461 aa16.77■□□□□ 0.28
CLDND1-224ENST00000511667 TTF2Q9UNY4 1162 aaKnown RBP16.77■□□□□ 0.28
CLDND1-224ENST00000511667 IQSEC3Q9UPP2 1182 aaPredicted RBP16.77■□□□□ 0.28
CLDND1-224ENST00000511667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.77■□□□□ 0.28
CLDND1-224ENST00000511667 SALL1Q9NSC2 1324 aa16.76■□□□□ 0.27
CLDND1-224ENST00000511667 PNMA6EA0A0J9YXQ4 647 aa16.76■□□□□ 0.27
CLDND1-224ENST00000511667 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
CLDND1-224ENST00000511667 CRKP46108 304 aa16.76■□□□□ 0.27
CLDND1-224ENST00000511667 VPS37DQ86XT2 251 aa16.76■□□□□ 0.27
CLDND1-224ENST00000511667 DZIP1LQ8IYY4 767 aaKnown RBP16.76■□□□□ 0.27
CLDND1-224ENST00000511667 CENPFP49454 3210 aa16.76■□□□□ 0.27
CLDND1-224ENST00000511667 MYH13Q9UKX3 1938 aa16.76■□□□□ 0.27
CLDND1-224ENST00000511667 PDS5AQ29RF7 1337 aaKnown RBP16.75■□□□□ 0.27
CLDND1-224ENST00000511667 UNCXA6NJT0 531 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 UBE2Q2LH0YL09 131 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 SEMA3EO15041 775 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 ALDH1A1P00352 501 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 SSH3Q8TE77 659 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 ARMC5Q96C12 935 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 ZDHHC15Q96MV8 337 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 R3HDMLQ9H3Y0 253 aa16.75■□□□□ 0.27
CLDND1-224ENST00000511667 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
CLDND1-224ENST00000511667 APOBEC3HQ6NTF7 200 aaKnown RBP16.74■□□□□ 0.27
CLDND1-224ENST00000511667 HHIPL2Q6UWX4 724 aa16.74■□□□□ 0.27
CLDND1-224ENST00000511667 WDR66Q8TBY9 1149 aa16.74■□□□□ 0.27
CLDND1-224ENST00000511667 TMEM106CQ9BVX2 250 aa16.74■□□□□ 0.27
CLDND1-224ENST00000511667 CLRN2A0PK11 232 aa16.73■□□□□ 0.27
CLDND1-224ENST00000511667 H0YGN5 161 aa16.73■□□□□ 0.27
CLDND1-224ENST00000511667 MYO1BO43795 1136 aa16.73■□□□□ 0.27
CLDND1-224ENST00000511667 ADORA1P30542 326 aa16.73■□□□□ 0.27
CLDND1-224ENST00000511667 PHKA1P46020 1223 aa16.73■□□□□ 0.27
CLDND1-224ENST00000511667 MKRN3Q13064 507 aaKnown RBP16.73■□□□□ 0.27
CLDND1-224ENST00000511667 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-224ENST00000511667 TTLL12Q14166 644 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-224ENST00000511667 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
CLDND1-224ENST00000511667 PTPN22Q9Y2R2 807 aa16.73■□□□□ 0.27
CLDND1-224ENST00000511667 BRCA2P51587 3418 aa16.72■□□□□ 0.27
CLDND1-224ENST00000511667 NF2P35240 595 aa16.72■□□□□ 0.27
CLDND1-224ENST00000511667 ATP8B2P98198 1209 aa16.72■□□□□ 0.27
CLDND1-224ENST00000511667 TFCP2Q12800 502 aa16.72■□□□□ 0.27
CLDND1-224ENST00000511667 RASA3Q14644 834 aa16.72■□□□□ 0.27
CLDND1-224ENST00000511667 CCDC102BQ68D86 513 aa16.72■□□□□ 0.27
CLDND1-224ENST00000511667 TDRD3Q9H7E2 651 aaKnown RBP16.72■□□□□ 0.27
CLDND1-224ENST00000511667 MAST3O60307 1309 aa16.71■□□□□ 0.27
CLDND1-224ENST00000511667 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
CLDND1-224ENST00000511667 MNX1P50219 401 aaPredicted RBP16.71■□□□□ 0.27
CLDND1-224ENST00000511667 TIMM10P62072 90 aa16.71■□□□□ 0.27
CLDND1-224ENST00000511667 NBPF12Q5TAG4 269 aaPredicted RBP16.71■□□□□ 0.27
CLDND1-224ENST00000511667 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
CLDND1-224ENST00000511667 TEKT1Q969V4 418 aa16.71■□□□□ 0.27
CLDND1-224ENST00000511667 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
CLDND1-224ENST00000511667 NOP58Q9Y2X3 529 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms