RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CHD2O14647 1828 aaKnown RBP5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 MED1Q15648 1581 aaPredicted RBP5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 PTPRUQ92729 1446 aa5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 MAP3K5Q99683 1374 aa5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 SLC35F4A4IF30 521 aa5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 CTIFO43310 598 aaKnown RBP5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 KIF20AO95235 890 aa5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 ADCY5O95622 1261 aa5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 PDIA4P13667 645 aaKnown RBP5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 RNF144AP50876 292 aaPredicted RBP5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 SUZ12Q15022 739 aaKnown RBP5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 KIAA1524Q8TCG1 905 aa5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 ANO2Q9NQ90 1003 aa5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 DIAPH3Q9NSV4 1193 aa5.6□□□□□ -1.51
SMARCC1-206ENST00000485737 RIMS1Q86UR5 1692 aaKnown RBP5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 USP6P35125 1406 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 ELP1O95163 1332 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 SGSM2O43147 1006 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 HTATSF1O43719 755 aaKnown RBP5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 STX6O43752 255 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 RAB11FIP3O75154 756 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 F13A1P00488 732 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 GNRH1P01148 92 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 ITGA6P23229 1130 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 SOX11P35716 441 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 ATP8B2P98198 1209 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 USP4Q13107 963 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 CLN3Q13286 438 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 DCTN1Q14203 1278 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 AEBP1Q8IUX7 1158 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 VWA5B2Q8N398 1253 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 TMEM151AQ8N4L1 468 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 SSH3Q8TE77 659 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 KCNB2Q92953 911 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 NUDT16Q96DE0 195 aaKnown RBP5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 KCNF1Q9H3M0 494 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 BABAM1Q9NWV8 329 aa5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.59□□□□□ -1.51
SMARCC1-206ENST00000485737 NWD1Q149M9 1564 aa5.59□□□□□ -1.52
SMARCC1-206ENST00000485737 CEP170BQ9Y4F5 1589 aaPredicted RBP5.59□□□□□ -1.52
SMARCC1-206ENST00000485737 SBNO1A3KN83 1393 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 METP08581 1390 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 FLT4P35916 1363 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 IGSF1Q8N6C5 1336 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 PRR36Q9H6K5 1346 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 GOLGA6L6A8MZA4 724 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 HCLS1P14317 486 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 FBLN1P23142 703 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 GPC1P35052 558 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 POU4F2Q12837 409 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 CHAF1AQ13111 956 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 RRS1Q15050 365 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 SULT6B1Q6IMI4 303 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 RIPOR1Q6ZS17 1223 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 G2E3Q7L622 706 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 PHTF2Q8N3S3 785 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 PLPP7Q8NBV4 271 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 PI4K2BQ8TCG2 481 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 FAM200AQ8TCP9 573 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 FOXD4L4Q8WXT5 416 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 CNKSR1Q969H4 720 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 FEZ1Q99689 392 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 UPF3BQ9BZI7 483 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 TM6SF1Q9BZW5 370 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 LSG1Q9H089 658 aaKnown RBP5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 TTC12Q9H892 705 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 SH2B1Q9NRF2 756 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 CNPY2Q9Y2B0 182 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 EXOC6BQ9Y2D4 811 aa5.58□□□□□ -1.52
SMARCC1-206ENST00000485737 JCADQ9P266 1359 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 TTC21AQ8NDW8 1320 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 PNMA6EA0A0J9YXQ4 647 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 PIK3CDO00329 1044 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 RAPGEF3O95398 923 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 STAU1O95793 577 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 IL2RAP01589 272 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 SYT1P21579 422 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 GTF2E1P29083 439 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 DNTTIP2Q5QJE6 756 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 RBM43Q6ZSC3 357 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 RUFY3Q7L099 469 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 SV2AQ7L0J3 742 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 MCM10Q7L590 875 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 WAPLQ7Z5K2 1190 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 UNC5CLQ8IV45 518 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 PDCL2Q8N4E4 241 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 GPR161Q8N6U8 529 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 RTF1Q92541 710 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 ZSCAN31Q96LW9 406 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 GAS2L1Q99501 681 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 STK31Q9BXU1 1019 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 IL25Q9H293 177 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 PYCARDQ9ULZ3 195 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 LIMCH1Q9UPQ0 1083 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 MTMR6Q9Y217 621 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 SNX14Q9Y5W7 946 aa5.57□□□□□ -1.52
SMARCC1-206ENST00000485737 MAP3K19Q56UN5 1328 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
SMARCC1-206ENST00000485737 SMTNL1A8MU46 457 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms