RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 MKRN3Q13064 507 aaKnown RBP14.37□□□□□ -0.11
SCFD1-206ENST00000484733 CDCA7LQ96GN5 454 aa14.37□□□□□ -0.11
SCFD1-206ENST00000484733 FBXO3Q9UK99 471 aa14.37□□□□□ -0.11
SCFD1-206ENST00000484733 CCER2I3L3R5 266 aa14.36□□□□□ -0.11
SCFD1-206ENST00000484733 PUM3Q15397 648 aaKnown RBP14.36□□□□□ -0.11
SCFD1-206ENST00000484733 TDRD3Q9H7E2 651 aaKnown RBP14.36□□□□□ -0.11
SCFD1-206ENST00000484733 SMC4Q9NTJ3 1288 aa14.36□□□□□ -0.11
SCFD1-206ENST00000484733 FZD1Q9UP38 647 aa14.36□□□□□ -0.11
SCFD1-206ENST00000484733 EYA2O00167 538 aa14.36□□□□□ -0.11
SCFD1-206ENST00000484733 IFIT1P09914 478 aaKnown RBP14.36□□□□□ -0.11
SCFD1-206ENST00000484733 ANKRD13AQ8IZ07 590 aa14.36□□□□□ -0.11
SCFD1-206ENST00000484733 CLMNQ96JQ2 1002 aa14.36□□□□□ -0.11
SCFD1-206ENST00000484733 TEPSINQ96N21 525 aa14.36□□□□□ -0.11
SCFD1-206ENST00000484733 FKTNO75072 461 aa14.35□□□□□ -0.11
SCFD1-206ENST00000484733 TNNI2P48788 182 aa14.35□□□□□ -0.11
SCFD1-206ENST00000484733 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
SCFD1-206ENST00000484733 TESPA1A2RU30 521 aaPredicted RBP14.35□□□□□ -0.11
SCFD1-206ENST00000484733 ZBTB22O15209 634 aa14.35□□□□□ -0.11
SCFD1-206ENST00000484733 GRIK5Q16478 980 aa14.35□□□□□ -0.11
SCFD1-206ENST00000484733 KLHDC4Q8TBB5 520 aa14.35□□□□□ -0.11
SCFD1-206ENST00000484733 HDAC5Q9UQL6 1122 aa14.35□□□□□ -0.11
SCFD1-206ENST00000484733 MAST3O60307 1309 aa14.34□□□□□ -0.11
SCFD1-206ENST00000484733 BCAMP50895 628 aa14.34□□□□□ -0.11
SCFD1-206ENST00000484733 CHAF1AQ13111 956 aaPredicted RBP14.34□□□□□ -0.11
SCFD1-206ENST00000484733 LPIN2Q92539 896 aa14.34□□□□□ -0.11
SCFD1-206ENST00000484733 API5Q9BZZ5 524 aaKnown RBP14.34□□□□□ -0.11
SCFD1-206ENST00000484733 FRAT2O75474 233 aaPredicted RBP14.33□□□□□ -0.11
SCFD1-206ENST00000484733 CIAO1O76071 339 aa14.33□□□□□ -0.11
SCFD1-206ENST00000484733 FKBP1CQ5VVH2 108 aa14.33□□□□□ -0.11
SCFD1-206ENST00000484733 ATG9AQ7Z3C6 839 aa14.33□□□□□ -0.11
SCFD1-206ENST00000484733 TEKT1Q969V4 418 aa14.33□□□□□ -0.11
SCFD1-206ENST00000484733 ZDHHC15Q96MV8 337 aa14.33□□□□□ -0.11
SCFD1-206ENST00000484733 IQSEC3Q9UPP2 1182 aaPredicted RBP14.33□□□□□ -0.11
SCFD1-206ENST00000484733 HPS5Q9UPZ3 1129 aa14.33□□□□□ -0.11
SCFD1-206ENST00000484733 OTOFQ9HC10 1997 aa14.33□□□□□ -0.12
SCFD1-206ENST00000484733 SLC5A1P13866 664 aa14.33□□□□□ -0.12
SCFD1-206ENST00000484733 GJA5P36382 358 aa14.33□□□□□ -0.12
SCFD1-206ENST00000484733 HHIPL2Q6UWX4 724 aa14.33□□□□□ -0.12
SCFD1-206ENST00000484733 R3HDMLQ9H3Y0 253 aa14.33□□□□□ -0.12
SCFD1-206ENST00000484733 NOB1Q9ULX3 412 aaKnown RBP14.33□□□□□ -0.12
SCFD1-206ENST00000484733 UBTFL1P0CB47 393 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-206ENST00000484733 TCP10L2B9ZVM9 353 aa14.32□□□□□ -0.12
SCFD1-206ENST00000484733 OTUD7BQ6GQQ9 843 aa14.32□□□□□ -0.12
SCFD1-206ENST00000484733 FBXO46Q6PJ61 603 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-206ENST00000484733 FAM83AQ86UY5 434 aa14.32□□□□□ -0.12
SCFD1-206ENST00000484733 WDR66Q8TBY9 1149 aa14.32□□□□□ -0.12
SCFD1-206ENST00000484733 IGF2BP3O00425 579 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCFD1-206ENST00000484733 MAP3K9P80192 1104 aa14.31□□□□□ -0.12
SCFD1-206ENST00000484733 ARHGAP45Q92619 1136 aa14.31□□□□□ -0.12
SCFD1-206ENST00000484733 TMEM39BQ9GZU3 492 aa14.31□□□□□ -0.12
SCFD1-206ENST00000484733 APOBEC3HQ6NTF7 200 aaKnown RBP14.31□□□□□ -0.12
SCFD1-206ENST00000484733 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.31□□□□□ -0.12
SCFD1-206ENST00000484733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCFD1-206ENST00000484733 MYH13Q9UKX3 1938 aa14.31□□□□□ -0.12
SCFD1-206ENST00000484733 RPAP1Q9BWH6 1393 aaPredicted RBP14.3□□□□□ -0.12
SCFD1-206ENST00000484733 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
SCFD1-206ENST00000484733 TMOD2Q9NZR1 351 aa14.3□□□□□ -0.12
SCFD1-206ENST00000484733 RARSP54136 660 aaKnown RBP14.3□□□□□ -0.12
SCFD1-206ENST00000484733 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
SCFD1-206ENST00000484733 OPTNQ96CV9 577 aa14.3□□□□□ -0.12
SCFD1-206ENST00000484733 MS4A4AQ96JQ5 239 aa14.3□□□□□ -0.12
SCFD1-206ENST00000484733 ELP3Q9H9T3 547 aa14.3□□□□□ -0.12
SCFD1-206ENST00000484733 CEP126Q9P2H0 1117 aa14.3□□□□□ -0.12
SCFD1-206ENST00000484733 IL15P40933 162 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-206ENST00000484733 COPRSQ9NQ92 184 aa14.29□□□□□ -0.12
SCFD1-206ENST00000484733 SEMA3EO15041 775 aa14.29□□□□□ -0.12
SCFD1-206ENST00000484733 SOX10P56693 466 aa14.29□□□□□ -0.12
SCFD1-206ENST00000484733 INTS3Q68E01 1043 aaKnown RBP14.29□□□□□ -0.12
SCFD1-206ENST00000484733 PTPN18Q99952 460 aa14.29□□□□□ -0.12
SCFD1-206ENST00000484733 GNL3LQ9NVN8 582 aaKnown RBP14.29□□□□□ -0.12
SCFD1-206ENST00000484733 SALL1Q9NSC2 1324 aa14.28□□□□□ -0.12
SCFD1-206ENST00000484733 VGLL4Q14135 290 aa14.28□□□□□ -0.12
SCFD1-206ENST00000484733 ATP2B3Q16720 1220 aa14.28□□□□□ -0.12
SCFD1-206ENST00000484733 CSADQ9Y600 493 aa14.28□□□□□ -0.12
SCFD1-206ENST00000484733 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
SCFD1-206ENST00000484733 GTF2A2P52657 109 aa14.27□□□□□ -0.12
SCFD1-206ENST00000484733 ERO1AQ96HE7 468 aa14.27□□□□□ -0.12
SCFD1-206ENST00000484733 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.27□□□□□ -0.12
SCFD1-206ENST00000484733 CRHR2Q13324 411 aa14.27□□□□□ -0.13
SCFD1-206ENST00000484733 DENND2AQ9ULE3 1009 aa14.27□□□□□ -0.13
SCFD1-206ENST00000484733 SPDYE5A6NIY4 337 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 FAM151AQ8WW52 585 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 SIL1Q9H173 461 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 GNAI3P08754 354 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 CACNB3P54284 484 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 MTX1Q13505 466 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 DCAF15Q66K64 600 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 OTOP1Q7RTM1 612 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 BRI3BPQ8WY22 251 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 MEIS3Q99687 375 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 ZCCHC17Q9NP64 241 aaKnown RBP14.26□□□□□ -0.13
SCFD1-206ENST00000484733 DAGLAQ9Y4D2 1042 aa14.26□□□□□ -0.13
SCFD1-206ENST00000484733 PDS5AQ29RF7 1337 aaKnown RBP14.25□□□□□ -0.13
SCFD1-206ENST00000484733 ERO1BQ86YB8 467 aa14.25□□□□□ -0.13
SCFD1-206ENST00000484733 SNCAIPQ9Y6H5 919 aa14.25□□□□□ -0.13
SCFD1-206ENST00000484733 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
SCFD1-206ENST00000484733 ZNF341Q9BYN7 854 aa14.25□□□□□ -0.13
SCFD1-206ENST00000484733 PA2G4Q9UQ80 394 aaKnown RBP14.25□□□□□ -0.13
SCFD1-206ENST00000484733 TRIM17Q9Y577 477 aa14.25□□□□□ -0.13
SCFD1-206ENST00000484733 CCL15-CCL14A0A0B4J2E2 113 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms