RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 A6NJR5 290 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 GRIK1P39086 918 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 GGT6Q6P531 493 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 INTS5Q6P9B9 1019 aaKnown RBP6.8□□□□□ -1.32
SSR3-204ENST00000467733 UBR1Q8IWV7 1749 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 AGGF1Q8N302 714 aaeCLIP6.8□□□□□ -1.32
SSR3-204ENST00000467733 FNBP4Q8N3X1 1017 aaPredicted RBP6.8□□□□□ -1.32
SSR3-204ENST00000467733 CLUAP1Q96AJ1 413 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 CALR3Q96L12 384 aaKnown RBP6.8□□□□□ -1.32
SSR3-204ENST00000467733 ARXQ96QS3 562 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 USP20Q9Y2K6 914 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 KCNMB2Q9Y691 235 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 ROBO1Q9Y6N7 1651 aa6.8□□□□□ -1.32
SSR3-204ENST00000467733 GP2P55259 537 aaKnown RBP6.79□□□□□ -1.32
SSR3-204ENST00000467733 NLRP13Q86W25 1043 aa6.79□□□□□ -1.32
SSR3-204ENST00000467733 LRFN2Q9ULH4 789 aa6.79□□□□□ -1.32
SSR3-204ENST00000467733 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
SSR3-204ENST00000467733 FAM135BQ49AJ0 1406 aa6.78□□□□□ -1.32
SSR3-204ENST00000467733 MIA2Q96PC5 1412 aa6.78□□□□□ -1.32
SSR3-204ENST00000467733 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
SSR3-204ENST00000467733 TGFB1P01137 390 aa6.78□□□□□ -1.32
SSR3-204ENST00000467733 HNRNPMP52272 730 aaKnown RBP eCLIP6.78□□□□□ -1.322e-9■■□□□ 12.7
SSR3-204ENST00000467733 THEMISQ8N1K5 641 aaPredicted RBP6.78□□□□□ -1.32
SSR3-204ENST00000467733 ZNF777Q9ULD5 760 aaPredicted RBP6.78□□□□□ -1.32
SSR3-204ENST00000467733 TIAM1Q13009 1591 aa6.78□□□□□ -1.32
SSR3-204ENST00000467733 RTEL1-TNFRSF6BF6WH68 1400 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 PHLPP1O60346 1717 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 LMOD1P29536 600 aaPredicted RBP6.77□□□□□ -1.33
SSR3-204ENST00000467733 CD68P34810 354 aaPredicted RBP6.77□□□□□ -1.33
SSR3-204ENST00000467733 NFIAQ12857 509 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 ACAD11Q709F0 780 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 ZDHHC13Q8IUH4 622 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 OR13H1Q8NG92 308 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 FAM200AQ8TCP9 573 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 UTP4Q969X6 686 aaKnown RBP6.77□□□□□ -1.33
SSR3-204ENST00000467733 SPACA7Q96KW9 195 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 UBL7Q96S82 380 aaPredicted RBP6.77□□□□□ -1.33
SSR3-204ENST00000467733 FAM13BQ9NYF5 915 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 OAS3Q9Y6K5 1087 aaKnown RBP6.77□□□□□ -1.33
SSR3-204ENST00000467733 DHX29Q7Z478 1369 aaKnown RBP6.77□□□□□ -1.33
SSR3-204ENST00000467733 LRRC9Q6ZRR7 1453 aa6.77□□□□□ -1.33
SSR3-204ENST00000467733 SCAF11Q99590 1463 aaKnown RBP6.77□□□□□ -1.33
SSR3-204ENST00000467733 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
SSR3-204ENST00000467733 TAL1P17542 331 aaPredicted RBP6.76□□□□□ -1.33
SSR3-204ENST00000467733 SPINK2P20155 84 aa6.76□□□□□ -1.33
SSR3-204ENST00000467733 FAM117BQ6P1L5 589 aa6.76□□□□□ -1.33
SSR3-204ENST00000467733 ERICH6Q7L0X2 663 aa6.76□□□□□ -1.33
SSR3-204ENST00000467733 DBNDD2Q9BQY9 259 aa6.76□□□□□ -1.33
SSR3-204ENST00000467733 MBD5Q9P267 1494 aa6.76□□□□□ -1.33
SSR3-204ENST00000467733 CFAP65Q6ZU64 1925 aaKnown RBP6.76□□□□□ -1.33
SSR3-204ENST00000467733 CEP152O94986 1710 aa6.76□□□□□ -1.33
SSR3-204ENST00000467733 SLIT1O75093 1534 aa6.76□□□□□ -1.33
SSR3-204ENST00000467733 MAP3K1Q13233 1512 aa6.76□□□□□ -1.33
SSR3-204ENST00000467733 ERVK-7P63135 1459 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 ARHGAP23Q9P227 1491 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 CCNB3Q8WWL7 1395 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 MED26O95402 600 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 BRD2P25440 801 aaKnown RBP6.75□□□□□ -1.33
SSR3-204ENST00000467733 HYAL2Q12891 473 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 COX20Q5RI15 118 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 ARMC10Q8N2F6 343 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 KLHL23Q8NBE8 558 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 GALNT11Q8NCW6 608 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 COL16A1Q07092 1604 aaPredicted RBP6.75□□□□□ -1.33
SSR3-204ENST00000467733 ABCC3O15438 1527 aa6.75□□□□□ -1.33
SSR3-204ENST00000467733 CCDC141Q6ZP82 1450 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 LINC01387J3KSC0 135 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 WISP1O95388 367 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 CDC27P30260 824 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 FKBP5Q13451 457 aaPredicted RBP6.74□□□□□ -1.33
SSR3-204ENST00000467733 TRIP4Q15650 581 aaPredicted RBP6.74□□□□□ -1.33
SSR3-204ENST00000467733 RNF43Q68DV7 783 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 PIK3R5Q8WYR1 880 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 FAM46AQ96IP4 442 aaKnown RBP6.74□□□□□ -1.33
SSR3-204ENST00000467733 MYRFLQ96LU7 910 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 C7orf69Q9H7B7 122 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 CFDP1Q9UEE9 299 aaPredicted RBP6.74□□□□□ -1.33
SSR3-204ENST00000467733 FNDC3AQ9Y2H6 1198 aaKnown RBP6.74□□□□□ -1.33
SSR3-204ENST00000467733 RNF114Q9Y508 228 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 EIF2AK4Q9P2K8 1649 aaKnown RBP6.74□□□□□ -1.33
SSR3-204ENST00000467733 NWD1Q149M9 1564 aa6.74□□□□□ -1.33
SSR3-204ENST00000467733 CAMSAP2Q08AD1 1489 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 NCOA2Q15596 1464 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 MROH1Q8NDA8 1641 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 EHBP1L1Q8N3D4 1523 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 FAM177BA6PVY3 158 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 SWI5Q1ZZU3 235 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 CEP135Q66GS9 1140 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 C16orf46Q6P387 395 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 C14orf37Q86TY3 774 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 DTX1Q86Y01 620 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 ETFBKMTQ8IXQ9 262 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 ZMYND15Q9H091 742 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 KDM5AP29375 1690 aaKnown RBP6.73□□□□□ -1.33
SSR3-204ENST00000467733 SHPRHQ149N8 1683 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 WASHC2CQ9Y4E1 1318 aa6.73□□□□□ -1.33
SSR3-204ENST00000467733 NKTRP30414 1462 aaKnown RBP6.73□□□□□ -1.33
SSR3-204ENST00000467733 KIF3BO15066 747 aa6.72□□□□□ -1.33
SSR3-204ENST00000467733 ATP11AP98196 1134 aa6.72□□□□□ -1.33
SSR3-204ENST00000467733 DUOXA2Q1HG44 320 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms