RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TMOD2Q9NZR1 351 aa17.33■□□□□ 0.36
PTPRE-203ENST00000442830 USP2O75604 605 aaPredicted RBP17.32■□□□□ 0.36
PTPRE-203ENST00000442830 PDE8BO95263 885 aa17.32■□□□□ 0.36
PTPRE-203ENST00000442830 CRKP46108 304 aa17.32■□□□□ 0.36
PTPRE-203ENST00000442830 ARHGEF6Q15052 776 aa17.32■□□□□ 0.36
PTPRE-203ENST00000442830 INTS3Q68E01 1043 aaKnown RBP17.32■□□□□ 0.36
PTPRE-203ENST00000442830 FBXO33Q7Z6M2 555 aa17.32■□□□□ 0.36
PTPRE-203ENST00000442830 KAZALD1Q96I82 304 aa17.32■□□□□ 0.36
PTPRE-203ENST00000442830 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
PTPRE-203ENST00000442830 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
PTPRE-203ENST00000442830 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
PTPRE-203ENST00000442830 IFIT1P09914 478 aaKnown RBP17.31■□□□□ 0.36
PTPRE-203ENST00000442830 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
PTPRE-203ENST00000442830 TEKT1Q969V4 418 aa17.31■□□□□ 0.36
PTPRE-203ENST00000442830 CLMNQ96JQ2 1002 aa17.31■□□□□ 0.36
PTPRE-203ENST00000442830 JAG2Q9Y219 1238 aa17.31■□□□□ 0.36
PTPRE-203ENST00000442830 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
PTPRE-203ENST00000442830 CSADQ9Y600 493 aa17.31■□□□□ 0.36
PTPRE-203ENST00000442830 PUM3Q15397 648 aaKnown RBP17.3■□□□□ 0.36
PTPRE-203ENST00000442830 ALDH1L2Q3SY69 923 aa17.3■□□□□ 0.36
PTPRE-203ENST00000442830 PRPF38BQ5VTL8 546 aaKnown RBP17.3■□□□□ 0.36
PTPRE-203ENST00000442830 FKBP1CQ5VVH2 108 aa17.3■□□□□ 0.36
PTPRE-203ENST00000442830 PUS3Q9BZE2 481 aaKnown RBP17.3■□□□□ 0.36
PTPRE-203ENST00000442830 TDRD3Q9H7E2 651 aaKnown RBP17.3■□□□□ 0.36
PTPRE-203ENST00000442830 FBXO3Q9UK99 471 aa17.3■□□□□ 0.36
PTPRE-203ENST00000442830 IGF2BP3O00425 579 aaKnown RBP eCLIP17.29■□□□□ 0.36
PTPRE-203ENST00000442830 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
PTPRE-203ENST00000442830 GTF2A2P52657 109 aa17.29■□□□□ 0.36
PTPRE-203ENST00000442830 VGLL2Q8N8G2 317 aa17.29■□□□□ 0.36
PTPRE-203ENST00000442830 TRIM17Q9Y577 477 aa17.29■□□□□ 0.36
PTPRE-203ENST00000442830 RBBP6Q7Z6E9 1792 aaKnown RBP17.29■□□□□ 0.36
PTPRE-203ENST00000442830 RPAP1Q9BWH6 1393 aaPredicted RBP17.28■□□□□ 0.36
PTPRE-203ENST00000442830 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
PTPRE-203ENST00000442830 FAM83AQ86UY5 434 aa17.28■□□□□ 0.36
PTPRE-203ENST00000442830 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
PTPRE-203ENST00000442830 OPTNQ96CV9 577 aa17.28■□□□□ 0.36
PTPRE-203ENST00000442830 ZDHHC15Q96MV8 337 aa17.28■□□□□ 0.36
PTPRE-203ENST00000442830 TEPSINQ96N21 525 aa17.28■□□□□ 0.36
PTPRE-203ENST00000442830 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
PTPRE-203ENST00000442830 FZD1Q9UP38 647 aa17.28■□□□□ 0.36
PTPRE-203ENST00000442830 TCP10L2B9ZVM9 353 aa17.27■□□□□ 0.36
PTPRE-203ENST00000442830 SLC5A1P13866 664 aa17.27■□□□□ 0.36
PTPRE-203ENST00000442830 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.36
PTPRE-203ENST00000442830 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
PTPRE-203ENST00000442830 OTOP1Q7RTM1 612 aa17.27■□□□□ 0.36
PTPRE-203ENST00000442830 WDR66Q8TBY9 1149 aa17.27■□□□□ 0.36
PTPRE-203ENST00000442830 SP3Q02447 781 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 CRHR2Q13324 411 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 DCAF15Q66K64 600 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 HHIPL2Q6UWX4 724 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.35
PTPRE-203ENST00000442830 LPIN2Q92539 896 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 USP44Q9H0E7 712 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 R3HDMLQ9H3Y0 253 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 ZFYVE28Q9HCC9 887 aa17.26■□□□□ 0.35
PTPRE-203ENST00000442830 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
PTPRE-203ENST00000442830 AOX1Q06278 1338 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 EYA2O00167 538 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 FGFR2P21802 821 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 GJA5P36382 358 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 VGLL4Q14135 290 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 TMEM39BQ9GZU3 492 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 EFCC1Q9HA90 598 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 PCDH10Q9P2E7 1040 aa17.25■□□□□ 0.35
PTPRE-203ENST00000442830 AK9Q5TCS8 1911 aa17.24■□□□□ 0.35
PTPRE-203ENST00000442830 SLFN5Q08AF3 891 aa17.24■□□□□ 0.35
PTPRE-203ENST00000442830 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.24■□□□□ 0.35
PTPRE-203ENST00000442830 ERO1BQ86YB8 467 aa17.24■□□□□ 0.35
PTPRE-203ENST00000442830 MS4A4AQ96JQ5 239 aa17.24■□□□□ 0.35
PTPRE-203ENST00000442830 GNL3LQ9NVN8 582 aaKnown RBP17.24■□□□□ 0.35
PTPRE-203ENST00000442830 IQSEC3Q9UPP2 1182 aaPredicted RBP17.24■□□□□ 0.35
PTPRE-203ENST00000442830 PTPN22Q9Y2R2 807 aa17.24■□□□□ 0.35
PTPRE-203ENST00000442830 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
PTPRE-203ENST00000442830 CCL15-CCL14A0A0B4J2E2 113 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 ZBTB22O15209 634 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 CIAO1O76071 339 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
PTPRE-203ENST00000442830 CETPP11597 493 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 BCAMP50895 628 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 TAF1CQ15572 869 aaPredicted RBP17.23■□□□□ 0.35
PTPRE-203ENST00000442830 CCL15Q16663 113 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
PTPRE-203ENST00000442830 SEMA3EO15041 775 aa17.22■□□□□ 0.35
PTPRE-203ENST00000442830 CD99L2Q8TCZ2 262 aa17.22■□□□□ 0.35
PTPRE-203ENST00000442830 WRNIP1Q96S55 665 aa17.22■□□□□ 0.35
PTPRE-203ENST00000442830 PTPN18Q99952 460 aa17.22■□□□□ 0.35
PTPRE-203ENST00000442830 HTTP42858 3142 aa17.22■□□□□ 0.35
PTPRE-203ENST00000442830 GNRH1P01148 92 aa17.21■□□□□ 0.35
PTPRE-203ENST00000442830 SNAPC2Q13487 334 aa17.21■□□□□ 0.35
PTPRE-203ENST00000442830 KIF22Q14807 665 aa17.21■□□□□ 0.35
PTPRE-203ENST00000442830 NBPF11Q86T75 865 aa17.21■□□□□ 0.35
PTPRE-203ENST00000442830 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
PTPRE-203ENST00000442830 BRI3BPQ8WY22 251 aa17.21■□□□□ 0.35
PTPRE-203ENST00000442830 ARMC5Q96C12 935 aa17.21■□□□□ 0.35
PTPRE-203ENST00000442830 OTUD5Q96G74 571 aa17.21■□□□□ 0.35
PTPRE-203ENST00000442830 ZNF341Q9BYN7 854 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms