RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 FAM9BQ8IZU0 186 aa7.54□□□□□ -1.2
PTPRR-204ENST00000440835 ARMC5Q96C12 935 aa7.54□□□□□ -1.2
PTPRR-204ENST00000440835 SSC5DA1L4H1 1573 aa7.53□□□□□ -1.2
PTPRR-204ENST00000440835 LDHAL6AQ6ZMR3 332 aa7.53□□□□□ -1.2
PTPRR-204ENST00000440835 JARID2Q92833 1246 aaPredicted RBP7.53□□□□□ -1.2
PTPRR-204ENST00000440835 GTF2A2P52657 109 aa7.53□□□□□ -1.2
PTPRR-204ENST00000440835 SOX10P56693 466 aa7.53□□□□□ -1.2
PTPRR-204ENST00000440835 HNRNPUQ00839 825 aaKnown RBP eCLIP7.53□□□□□ -1.2
PTPRR-204ENST00000440835 CERS5Q8N5B7 392 aa7.53□□□□□ -1.2
PTPRR-204ENST00000440835 CNNM1Q9NRU3 951 aa7.53□□□□□ -1.2
PTPRR-204ENST00000440835 HDAC5Q9UQL6 1122 aa7.53□□□□□ -1.2
PTPRR-204ENST00000440835 HIBADHP31937 336 aaKnown RBP7.52□□□□□ -1.21
PTPRR-204ENST00000440835 FAM83AQ86UY5 434 aa7.52□□□□□ -1.21
PTPRR-204ENST00000440835 SRCIN1Q9C0H9 1055 aa7.52□□□□□ -1.21
PTPRR-204ENST00000440835 C9orf78Q9NZ63 289 aaPredicted RBP7.52□□□□□ -1.21
PTPRR-204ENST00000440835 PTPRCP08575 1304 aa7.52□□□□□ -1.21
PTPRR-204ENST00000440835 RABL6Q3YEC7 729 aaPredicted RBP7.52□□□□□ -1.21
PTPRR-204ENST00000440835 LMBR1LQ6UX01 489 aa7.52□□□□□ -1.21
PTPRR-204ENST00000440835 MOB2Q70IA6 237 aa7.52□□□□□ -1.21
PTPRR-204ENST00000440835 BCCIPQ9P287 314 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPRR-204ENST00000440835 PTPN22Q9Y2R2 807 aa7.52□□□□□ -1.21
PTPRR-204ENST00000440835 USP2O75604 605 aaPredicted RBP7.51□□□□□ -1.21
PTPRR-204ENST00000440835 MAP3K9P80192 1104 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 OTOP1Q7RTM1 612 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 FBXO33Q7Z6M2 555 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 NBPF11Q86T75 865 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 HELBQ8NG08 1087 aaPredicted RBP7.51□□□□□ -1.21
PTPRR-204ENST00000440835 MXD3Q9BW11 206 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 ZFYVE28Q9HCC9 887 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 ZNF70Q9UC06 446 aaPredicted RBP7.51□□□□□ -1.21
PTPRR-204ENST00000440835 MYH13Q9UKX3 1938 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 SP3Q02447 781 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 EXOSC9Q06265 439 aaKnown RBP7.51□□□□□ -1.21
PTPRR-204ENST00000440835 RASA3Q14644 834 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 CAVIN4Q5BKX8 364 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 DCAF15Q66K64 600 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 TMOD2Q9NZR1 351 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
PTPRR-204ENST00000440835 CSADQ9Y600 493 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 PCNTO95613 3336 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 KLRK1P26718 216 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 MFSD14BQ5SR56 506 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 HHIPL2Q6UWX4 724 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 PRMT6Q96LA8 375 aaPredicted RBP7.51□□□□□ -1.21
PTPRR-204ENST00000440835 EFCC1Q9HA90 598 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 RIPOR2Q9Y4F9 1068 aa7.51□□□□□ -1.21
PTPRR-204ENST00000440835 WTIPA6NIX2 430 aaPredicted RBP7.5□□□□□ -1.21
PTPRR-204ENST00000440835 CETPP11597 493 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 KIF22Q14807 665 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 DHX37Q8IY37 1157 aaKnown RBP7.5□□□□□ -1.21
PTPRR-204ENST00000440835 DZIP1LQ8IYY4 767 aaKnown RBP7.5□□□□□ -1.21
PTPRR-204ENST00000440835 ZDHHC15Q96MV8 337 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 TTF2Q9UNY4 1162 aaKnown RBP7.5□□□□□ -1.21
PTPRR-204ENST00000440835 CHMP3Q9Y3E7 222 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 TRIM17Q9Y577 477 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 PDE4DIPQ5VU43 2346 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 TAF5LO75529 589 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 CRKP46108 304 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 RBM5P52756 815 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPRR-204ENST00000440835 NBPF12Q5TAG4 269 aaPredicted RBP7.5□□□□□ -1.21
PTPRR-204ENST00000440835 PRAMEF18Q5VWM3 479 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPRR-204ENST00000440835 TEKT1Q969V4 418 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 FAM84BQ96KN1 310 aaPredicted RBP7.5□□□□□ -1.21
PTPRR-204ENST00000440835 TEPSINQ96N21 525 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 VEZTQ9HBM0 779 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 ZBED9Q6R2W3 1325 aa7.5□□□□□ -1.21
PTPRR-204ENST00000440835 SPDYE5A6NIY4 337 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 IGF2BP3O00425 579 aaKnown RBP eCLIP7.49□□□□□ -1.21
PTPRR-204ENST00000440835 CT47B1P0C2W7 299 aaPredicted RBP7.49□□□□□ -1.21
PTPRR-204ENST00000440835 PPIL2Q13356 520 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 ERO1BQ86YB8 467 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 WDR66Q8TBY9 1149 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 OPTNQ96CV9 577 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 MS4A4AQ96JQ5 239 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 TMEM106CQ9BVX2 250 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 SEMA3EO15041 775 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 MAP4K4O95819 1239 aaPredicted RBP7.49□□□□□ -1.21
PTPRR-204ENST00000440835 ANP32AP39687 249 aaKnown RBP7.49□□□□□ -1.21
PTPRR-204ENST00000440835 CRHR2Q13324 411 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 CCDC184Q52MB2 194 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 VPS37DQ86XT2 251 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 ZMYND15Q9H091 742 aa7.49□□□□□ -1.21
PTPRR-204ENST00000440835 IGSF3O75054 1194 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 PDE8BO95263 885 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 IFIT1P09914 478 aaKnown RBP7.48□□□□□ -1.21
PTPRR-204ENST00000440835 HOXD10P28358 340 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 PPATQ06203 517 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 SNAPC2Q13487 334 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 CLMNQ96JQ2 1002 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 PDS5AQ29RF7 1337 aaKnown RBP7.48□□□□□ -1.21
PTPRR-204ENST00000440835 SALL1Q9NSC2 1324 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 CLRN2A0PK11 232 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 PUM3Q15397 648 aaKnown RBP7.48□□□□□ -1.21
PTPRR-204ENST00000440835 ALDH1L2Q3SY69 923 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 NOL9Q5SY16 702 aaKnown RBP7.48□□□□□ -1.21
PTPRR-204ENST00000440835 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.48□□□□□ -1.21
PTPRR-204ENST00000440835 NKX2-3Q8TAU0 364 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 ZNF341Q9BYN7 854 aa7.48□□□□□ -1.21
PTPRR-204ENST00000440835 CCL15-CCL14A0A0B4J2E2 113 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms