RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
CLK1-203ENST00000409769 ICMTO60725 284 aa8.04□□□□□ -1.12
CLK1-203ENST00000409769 SOX4Q06945 474 aaPredicted RBP8.04□□□□□ -1.12
CLK1-203ENST00000409769 PCDH1Q08174 1060 aa8.04□□□□□ -1.12
CLK1-203ENST00000409769 PDE3BQ13370 1112 aa8.04□□□□□ -1.12
CLK1-203ENST00000409769 ZNF211Q13398 564 aaPredicted RBP8.04□□□□□ -1.12
CLK1-203ENST00000409769 TXNDC2Q86VQ3 553 aa8.04□□□□□ -1.12
CLK1-203ENST00000409769 EZH1Q92800 747 aaPredicted RBP8.04□□□□□ -1.12
CLK1-203ENST00000409769 FMNL2Q96PY5 1086 aa8.04□□□□□ -1.12
CLK1-203ENST00000409769 LATS2Q9NRM7 1088 aa8.04□□□□□ -1.12
CLK1-203ENST00000409769 NDUFB5O43674 189 aa8.03□□□□□ -1.12
CLK1-203ENST00000409769 FOSL1P15407 271 aa8.03□□□□□ -1.12
CLK1-203ENST00000409769 TAL1P17542 331 aaPredicted RBP8.03□□□□□ -1.12
CLK1-203ENST00000409769 NFKBIBQ15653 356 aa8.03□□□□□ -1.12
CLK1-203ENST00000409769 NRSN2Q9GZP1 204 aa8.03□□□□□ -1.12
CLK1-203ENST00000409769 LIN7BQ9HAP6 207 aa8.03□□□□□ -1.12
CLK1-203ENST00000409769 GNEQ9Y223 722 aaKnown RBP8.03□□□□□ -1.12
CLK1-203ENST00000409769 A0A1W2PP55 124 aa8.02□□□□□ -1.13
CLK1-203ENST00000409769 DLGAP3O95886 979 aa8.02□□□□□ -1.13
CLK1-203ENST00000409769 F13BP05160 661 aa8.02□□□□□ -1.13
CLK1-203ENST00000409769 KIAA0319Q5VV43 1072 aa8.02□□□□□ -1.13
CLK1-203ENST00000409769 KRTAP1-3Q8IUG1 177 aa8.02□□□□□ -1.13
CLK1-203ENST00000409769 GLYCTKQ8IVS8 523 aa8.02□□□□□ -1.13
CLK1-203ENST00000409769 C2CD4AQ8NCU7 369 aaPredicted RBP8.02□□□□□ -1.13
CLK1-203ENST00000409769 CITED4Q96RK1 184 aa8.02□□□□□ -1.13
CLK1-203ENST00000409769 ANGEL1Q9UNK9 670 aaKnown RBP8.02□□□□□ -1.13
CLK1-203ENST00000409769 METTL12A8MUP2 240 aa8.01□□□□□ -1.13
CLK1-203ENST00000409769 ADH5P11766 374 aa8.01□□□□□ -1.13
CLK1-203ENST00000409769 MAP7Q14244 749 aa8.01□□□□□ -1.13
CLK1-203ENST00000409769 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
CLK1-203ENST00000409769 FBXL6Q8N531 539 aa8.01□□□□□ -1.13
CLK1-203ENST00000409769 TCF12Q99081 682 aa8.01□□□□□ -1.13
CLK1-203ENST00000409769 ANO2Q9NQ90 1003 aa8.01□□□□□ -1.13
CLK1-203ENST00000409769 H3BRB1 525 aa8□□□□□ -1.13
CLK1-203ENST00000409769 POLR3DP05423 398 aaPredicted RBP8□□□□□ -1.13
CLK1-203ENST00000409769 PTPN12Q05209 780 aaKnown RBP8□□□□□ -1.13
CLK1-203ENST00000409769 POU4F3Q15319 338 aa8□□□□□ -1.13
CLK1-203ENST00000409769 MSMPQ1L6U9 139 aa8□□□□□ -1.13
CLK1-203ENST00000409769 CDPF1Q6NVV7 123 aa8□□□□□ -1.13
CLK1-203ENST00000409769 FBLIM1Q8WUP2 373 aa8□□□□□ -1.13
CLK1-203ENST00000409769 TUT1Q9H6E5 874 aaKnown RBP8□□□□□ -1.13
CLK1-203ENST00000409769 SYNGAP1Q96PV0 1343 aa8□□□□□ -1.13
CLK1-203ENST00000409769 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.99□□□□□ -1.13
CLK1-203ENST00000409769 ADAMTS4O75173 837 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 PRNPP04156 253 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 DRD2P14416 443 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 MAOBP27338 520 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 GRIA4P48058 902 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 HNRNPUQ00839 825 aaKnown RBP eCLIP7.99□□□□□ -1.13
CLK1-203ENST00000409769 CYP27A1Q02318 531 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 KCNA1Q09470 495 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 ZAR1Q86SH2 424 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 FBXL18Q96ME1 805 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 CORO1BQ9BR76 489 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 PRKAG2Q9UGJ0 569 aa7.99□□□□□ -1.13
CLK1-203ENST00000409769 PATL2C9JE40 543 aaKnown RBP7.98□□□□□ -1.13
CLK1-203ENST00000409769 CPNE3O75131 537 aaKnown RBP7.98□□□□□ -1.13
CLK1-203ENST00000409769 B3GALT4O96024 378 aa7.98□□□□□ -1.13
CLK1-203ENST00000409769 ITPKAP23677 461 aa7.98□□□□□ -1.13
CLK1-203ENST00000409769 HOXA10P31260 410 aaPredicted RBP7.98□□□□□ -1.13
CLK1-203ENST00000409769 ZNF423Q2M1K9 1284 aa7.98□□□□□ -1.13
CLK1-203ENST00000409769 VSIG10LQ86VR7 867 aa7.98□□□□□ -1.13
CLK1-203ENST00000409769 CCER1Q8TC90 406 aaPredicted RBP7.98□□□□□ -1.13
CLK1-203ENST00000409769 DNAJC25Q9H1X3 360 aa7.98□□□□□ -1.13
CLK1-203ENST00000409769 RAD18Q9NS91 495 aa7.98□□□□□ -1.13
CLK1-203ENST00000409769 CYP26A1O43174 497 aa7.97□□□□□ -1.13
CLK1-203ENST00000409769 AP3B2Q13367 1082 aa7.97□□□□□ -1.13
CLK1-203ENST00000409769 FAM129BQ96TA1 746 aa7.97□□□□□ -1.13
CLK1-203ENST00000409769 EHD4Q9H223 541 aa7.97□□□□□ -1.13
CLK1-203ENST00000409769 ZNF576Q9H609 170 aa7.97□□□□□ -1.13
CLK1-203ENST00000409769 SPRED3Q2MJR0 410 aa7.96□□□□□ -1.14
CLK1-203ENST00000409769 RPS26P11Q5JNZ5 115 aaPredicted RBP7.96□□□□□ -1.14
CLK1-203ENST00000409769 DUSP27Q5VZP5 1158 aa7.96□□□□□ -1.14
CLK1-203ENST00000409769 BSDC1Q9NW68 430 aaPredicted RBP7.96□□□□□ -1.14
CLK1-203ENST00000409769 CCDC39Q9UFE4 941 aa7.96□□□□□ -1.14
CLK1-203ENST00000409769 ADGRE2Q9UHX3 823 aa7.96□□□□□ -1.14
CLK1-203ENST00000409769 RNF114Q9Y508 228 aa7.96□□□□□ -1.14
CLK1-203ENST00000409769 ACTL7BQ9Y614 415 aa7.96□□□□□ -1.14
CLK1-203ENST00000409769 BTBD11A6QL63 1104 aa7.95□□□□□ -1.14
CLK1-203ENST00000409769 PDIA4P13667 645 aaKnown RBP7.95□□□□□ -1.14
CLK1-203ENST00000409769 PRPF40BQ6NWY9 871 aaKnown RBP7.95□□□□□ -1.14
CLK1-203ENST00000409769 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
CLK1-203ENST00000409769 GSX1Q9H4S2 264 aaPredicted RBP7.95□□□□□ -1.14
CLK1-203ENST00000409769 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
CLK1-203ENST00000409769 YBX3P16989 372 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLK1-203ENST00000409769 SERPINB4P48594 390 aa7.94□□□□□ -1.14
CLK1-203ENST00000409769 ARHGAP4P98171 946 aa7.94□□□□□ -1.14
CLK1-203ENST00000409769 ECM1Q16610 540 aa7.94□□□□□ -1.14
CLK1-203ENST00000409769 AKAP4Q5JQC9 854 aa7.94□□□□□ -1.14
CLK1-203ENST00000409769 DYMQ7RTS9 669 aa7.94□□□□□ -1.14
CLK1-203ENST00000409769 TRIM56Q9BRZ2 755 aaKnown RBP7.94□□□□□ -1.14
CLK1-203ENST00000409769 ACSS3Q9H6R3 686 aa7.94□□□□□ -1.14
CLK1-203ENST00000409769 NPHS2Q9NP85 383 aa7.94□□□□□ -1.14
CLK1-203ENST00000409769 AP4E1Q9UPM8 1137 aa7.94□□□□□ -1.14
CLK1-203ENST00000409769 AGBL5Q8NDL9 886 aa7.93□□□□□ -1.14
CLK1-203ENST00000409769 GATA6Q92908 595 aa7.93□□□□□ -1.14
CLK1-203ENST00000409769 DMRTB1Q96MA1 342 aa7.93□□□□□ -1.14
CLK1-203ENST00000409769 SEMA6CQ9H3T2 930 aa7.93□□□□□ -1.14
CLK1-203ENST00000409769 CTSBP07858 339 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms