RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
BRCC3-205ENST00000399026 PSMD14O00487 310 aa10.39□□□□□ -0.75
BRCC3-205ENST00000399026 DPYSL4O14531 572 aa10.39□□□□□ -0.75
BRCC3-205ENST00000399026 PTPREP23469 700 aa10.39□□□□□ -0.75
BRCC3-205ENST00000399026 GMPSP49915 693 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-205ENST00000399026 SCNN1DP51172 638 aa10.39□□□□□ -0.75
BRCC3-205ENST00000399026 CEP85Q6P2H3 762 aa10.39□□□□□ -0.75
BRCC3-205ENST00000399026 DDX19BQ9UMR2 479 aa10.39□□□□□ -0.75
BRCC3-205ENST00000399026 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
BRCC3-205ENST00000399026 GYG1P46976 350 aa10.38□□□□□ -0.75
BRCC3-205ENST00000399026 PDE3AQ14432 1141 aa10.38□□□□□ -0.75
BRCC3-205ENST00000399026 MXD3Q9BW11 206 aa10.38□□□□□ -0.75
BRCC3-205ENST00000399026 COPRSQ9NQ92 184 aa10.38□□□□□ -0.75
BRCC3-205ENST00000399026 JAG2Q9Y219 1238 aa10.38□□□□□ -0.75
BRCC3-205ENST00000399026 COL1A1P02452 1464 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-205ENST00000399026 CIAO1O76071 339 aa10.37□□□□□ -0.75
BRCC3-205ENST00000399026 PDE8BO95263 885 aa10.37□□□□□ -0.75
BRCC3-205ENST00000399026 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-205ENST00000399026 LMOD1P29536 600 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-205ENST00000399026 UBE4AQ14139 1066 aa10.37□□□□□ -0.75
BRCC3-205ENST00000399026 PUM3Q15397 648 aaKnown RBP10.37□□□□□ -0.75
BRCC3-205ENST00000399026 EAPPQ56P03 285 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-205ENST00000399026 ZNF804AQ7Z570 1209 aa10.37□□□□□ -0.75
BRCC3-205ENST00000399026 C16orf71Q8IYS4 520 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-205ENST00000399026 HACL1Q9UJ83 578 aa10.37□□□□□ -0.75
BRCC3-205ENST00000399026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-205ENST00000399026 IQCA1LA6NCM1 817 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 EPHX2P34913 555 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 IL15P40933 162 aaPredicted RBP10.36□□□□□ -0.75
BRCC3-205ENST00000399026 EPS15P42566 896 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 ATP8B2P98198 1209 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 TFCP2Q12800 502 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 TNIP1Q15025 636 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 ATP2B3Q16720 1220 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 SSH3Q8TE77 659 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 CRBNQ96SW2 442 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 SLC4A5Q9BY07 1137 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 COA1Q9GZY4 146 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 TAF1DQ9H5J8 278 aaPredicted RBP10.36□□□□□ -0.75
BRCC3-205ENST00000399026 CD209Q9NNX6 404 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 ZBTB40Q9NUA8 1239 aa10.36□□□□□ -0.75
BRCC3-205ENST00000399026 IQSEC3Q9UPP2 1182 aaPredicted RBP10.36□□□□□ -0.75
BRCC3-205ENST00000399026 SLC5A1P13866 664 aa10.35□□□□□ -0.75
BRCC3-205ENST00000399026 FGFR2P21802 821 aa10.35□□□□□ -0.75
BRCC3-205ENST00000399026 ADORA1P30542 326 aa10.35□□□□□ -0.75
BRCC3-205ENST00000399026 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
BRCC3-205ENST00000399026 C15orf52Q6ZUT6 534 aaKnown RBP10.35□□□□□ -0.75
BRCC3-205ENST00000399026 PODNQ7Z5L7 613 aa10.35□□□□□ -0.75
BRCC3-205ENST00000399026 TRPM4Q8TD43 1214 aa10.35□□□□□ -0.75
BRCC3-205ENST00000399026 GPRC5DQ9NZD1 345 aa10.35□□□□□ -0.75
BRCC3-205ENST00000399026 CEP126Q9P2H0 1117 aa10.35□□□□□ -0.75
BRCC3-205ENST00000399026 USP17L3A6NCW0 530 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 USP17L4A6NCW7 530 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 SURF6O75683 361 aaKnown RBP10.34□□□□□ -0.75
BRCC3-205ENST00000399026 EGFRP00533 1210 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 IFIT1P09914 478 aaKnown RBP10.34□□□□□ -0.75
BRCC3-205ENST00000399026 IL1R1P14778 569 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 BCAMP50895 628 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 GTF2IP78347 998 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 G3BP1Q13283 466 aaKnown RBP eCLIP10.34□□□□□ -0.75
BRCC3-205ENST00000399026 DACT2Q5SW24 774 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 RSBN1LQ6PCB5 846 aaPredicted RBP10.34□□□□□ -0.75
BRCC3-205ENST00000399026 USP17L1Q7RTZ2 530 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 SIRT2Q8IXJ6 389 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 LPIN2Q92539 896 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 FAM84BQ96KN1 310 aaPredicted RBP10.34□□□□□ -0.75
BRCC3-205ENST00000399026 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 EXOC6BQ9Y2D4 811 aa10.34□□□□□ -0.75
BRCC3-205ENST00000399026 ECM29Q5VYK3 1845 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 A0A1B0GUL7 405 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 APBB1O00213 710 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 TOMM70O94826 608 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 SASH1O94885 1247 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 VIL1P09327 827 aaKnown RBP10.33□□□□□ -0.76
BRCC3-205ENST00000399026 HIBADHP31937 336 aaKnown RBP10.33□□□□□ -0.76
BRCC3-205ENST00000399026 CHAF1AQ13111 956 aaPredicted RBP10.33□□□□□ -0.76
BRCC3-205ENST00000399026 TBC1D10BQ4KMP7 808 aaPredicted RBP10.33□□□□□ -0.76
BRCC3-205ENST00000399026 TYW1BQ6NUM6 668 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 SAMD7Q7Z3H4 446 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 CERS5Q8N5B7 392 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 RBM46Q8TBY0 533 aaKnown RBP10.33□□□□□ -0.76
BRCC3-205ENST00000399026 CNOT7Q9UIV1 285 aaKnown RBP10.33□□□□□ -0.76
BRCC3-205ENST00000399026 SUPT16HQ9Y5B9 1047 aaKnown RBP10.33□□□□□ -0.76
BRCC3-205ENST00000399026 MAST2Q6P0Q8 1798 aa10.33□□□□□ -0.76
BRCC3-205ENST00000399026 F8W031 263 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-205ENST00000399026 RPS12P25398 132 aaKnown RBP10.32□□□□□ -0.76
BRCC3-205ENST00000399026 PHKA1P46020 1223 aa10.32□□□□□ -0.76
BRCC3-205ENST00000399026 C1QTNF8P60827 252 aa10.32□□□□□ -0.76
BRCC3-205ENST00000399026 IRX6P78412 446 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-205ENST00000399026 CAVIN4Q5BKX8 364 aa10.32□□□□□ -0.76
BRCC3-205ENST00000399026 RBM26Q5T8P6 1007 aaKnown RBP10.32□□□□□ -0.76
BRCC3-205ENST00000399026 STRIP1Q5VSL9 837 aa10.32□□□□□ -0.76
BRCC3-205ENST00000399026 TTLL5Q6EMB2 1281 aa10.32□□□□□ -0.76
BRCC3-205ENST00000399026 FBXO33Q7Z6M2 555 aa10.32□□□□□ -0.76
BRCC3-205ENST00000399026 KIAA0825Q8IV33 1275 aa10.32□□□□□ -0.76
BRCC3-205ENST00000399026 BCL11AQ9H165 835 aa10.32□□□□□ -0.76
BRCC3-205ENST00000399026 CHMP4BQ9H444 224 aaKnown RBP10.32□□□□□ -0.76
BRCC3-205ENST00000399026 ADARB2Q9NS39 739 aaKnown RBP10.32□□□□□ -0.76
BRCC3-205ENST00000399026 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms