RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 RASA3Q14644 834 aa15.5■□□□□ 0.07
CTSC-202ENST00000393301 NBPF12Q5TAG4 269 aaPredicted RBP15.5■□□□□ 0.07
CTSC-202ENST00000393301 FKBP1CQ5VVH2 108 aa15.5■□□□□ 0.07
CTSC-202ENST00000393301 DZIP1LQ8IYY4 767 aaKnown RBP15.5■□□□□ 0.07
CTSC-202ENST00000393301 TBC1D8O95759 1140 aa15.49■□□□□ 0.07
CTSC-202ENST00000393301 CRKP46108 304 aa15.49■□□□□ 0.07
CTSC-202ENST00000393301 IREB2P48200 963 aaKnown RBP15.49■□□□□ 0.07
CTSC-202ENST00000393301 METTL24Q5JXM2 366 aa15.49■□□□□ 0.07
CTSC-202ENST00000393301 IFNL1Q8IU54 200 aa15.49■□□□□ 0.07
CTSC-202ENST00000393301 ANKRD13AQ8IZ07 590 aa15.49■□□□□ 0.07
CTSC-202ENST00000393301 SLC10A4Q96EP9 437 aa15.49■□□□□ 0.07
CTSC-202ENST00000393301 JAG2Q9Y219 1238 aa15.49■□□□□ 0.07
CTSC-202ENST00000393301 CENPFP49454 3210 aa15.49■□□□□ 0.07
CTSC-202ENST00000393301 PUM3Q15397 648 aaKnown RBP15.48■□□□□ 0.07
CTSC-202ENST00000393301 CAVIN4Q5BKX8 364 aa15.48■□□□□ 0.07
CTSC-202ENST00000393301 CLMNQ96JQ2 1002 aa15.48■□□□□ 0.07
CTSC-202ENST00000393301 ZDHHC15Q96MV8 337 aa15.48■□□□□ 0.07
CTSC-202ENST00000393301 VEZTQ9HBM0 779 aa15.48■□□□□ 0.07
CTSC-202ENST00000393301 HPS5Q9UPZ3 1129 aa15.48■□□□□ 0.07
CTSC-202ENST00000393301 RBBP6Q7Z6E9 1792 aaKnown RBP15.48■□□□□ 0.07
CTSC-202ENST00000393301 MAST3O60307 1309 aa15.47■□□□□ 0.07
CTSC-202ENST00000393301 EYA2O00167 538 aa15.47■□□□□ 0.07
CTSC-202ENST00000393301 FKTNO75072 461 aa15.47■□□□□ 0.07
CTSC-202ENST00000393301 GJA5P36382 358 aa15.47■□□□□ 0.07
CTSC-202ENST00000393301 PRKG1Q13976 671 aa15.47■□□□□ 0.07
CTSC-202ENST00000393301 GRIK5Q16478 980 aa15.47■□□□□ 0.07
CTSC-202ENST00000393301 FBXO46Q6PJ61 603 aaPredicted RBP15.47■□□□□ 0.07
CTSC-202ENST00000393301 FAM83AQ86UY5 434 aa15.47■□□□□ 0.07
CTSC-202ENST00000393301 FZD1Q9UP38 647 aa15.47■□□□□ 0.07
CTSC-202ENST00000393301 IGF2BP3O00425 579 aaKnown RBP eCLIP15.46■□□□□ 0.07
CTSC-202ENST00000393301 CIAO1O76071 339 aa15.46■□□□□ 0.07
CTSC-202ENST00000393301 TNNI2P48788 182 aa15.46■□□□□ 0.07
CTSC-202ENST00000393301 RBM5P52756 815 aaKnown RBP eCLIP15.46■□□□□ 0.07
CTSC-202ENST00000393301 ATG9AQ7Z3C6 839 aa15.46■□□□□ 0.07
CTSC-202ENST00000393301 VPS37DQ86XT2 251 aa15.46■□□□□ 0.07
CTSC-202ENST00000393301 R3HDMLQ9H3Y0 253 aa15.46■□□□□ 0.07
CTSC-202ENST00000393301 TDRD3Q9H7E2 651 aaKnown RBP15.46■□□□□ 0.07
CTSC-202ENST00000393301 KIAA0100Q14667 2235 aaKnown RBP15.45■□□□□ 0.06
CTSC-202ENST00000393301 IFIT1P09914 478 aaKnown RBP15.45■□□□□ 0.06
CTSC-202ENST00000393301 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTSC-202ENST00000393301 MKRN3Q13064 507 aaKnown RBP15.45■□□□□ 0.06
CTSC-202ENST00000393301 HHIPL2Q6UWX4 724 aa15.45■□□□□ 0.06
CTSC-202ENST00000393301 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
CTSC-202ENST00000393301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTSC-202ENST00000393301 LPIN2Q92539 896 aa15.45■□□□□ 0.06
CTSC-202ENST00000393301 TEKT1Q969V4 418 aa15.45■□□□□ 0.06
CTSC-202ENST00000393301 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
CTSC-202ENST00000393301 SMC4Q9NTJ3 1288 aa15.45■□□□□ 0.06
CTSC-202ENST00000393301 MKI67P46013 3256 aaKnown RBP15.44■□□□□ 0.06
CTSC-202ENST00000393301 BRCA2P51587 3418 aa15.44■□□□□ 0.06
CTSC-202ENST00000393301 BCAMP50895 628 aa15.44■□□□□ 0.06
CTSC-202ENST00000393301 APOBEC3HQ6NTF7 200 aaKnown RBP15.44■□□□□ 0.06
CTSC-202ENST00000393301 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
CTSC-202ENST00000393301 MS4A4AQ96JQ5 239 aa15.44■□□□□ 0.06
CTSC-202ENST00000393301 HDAC5Q9UQL6 1122 aa15.44■□□□□ 0.06
CTSC-202ENST00000393301 SALL1Q9NSC2 1324 aa15.43■□□□□ 0.06
CTSC-202ENST00000393301 SLC5A1P13866 664 aa15.43■□□□□ 0.06
CTSC-202ENST00000393301 OTUD7BQ6GQQ9 843 aa15.43■□□□□ 0.06
CTSC-202ENST00000393301 CDAN1Q8IWY9 1227 aa15.43■□□□□ 0.06
CTSC-202ENST00000393301 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
CTSC-202ENST00000393301 ARHGAP45Q92619 1136 aa15.43■□□□□ 0.06
CTSC-202ENST00000393301 API5Q9BZZ5 524 aaKnown RBP15.43■□□□□ 0.06
CTSC-202ENST00000393301 TMEM39BQ9GZU3 492 aa15.43■□□□□ 0.06
CTSC-202ENST00000393301 SEMA3EO15041 775 aa15.42■□□□□ 0.06
CTSC-202ENST00000393301 SLC34A2O95436 690 aa15.42■□□□□ 0.06
CTSC-202ENST00000393301 UBTFL1P0CB47 393 aaPredicted RBP15.42■□□□□ 0.06
CTSC-202ENST00000393301 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
CTSC-202ENST00000393301 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
CTSC-202ENST00000393301 PTPN18Q99952 460 aa15.42■□□□□ 0.06
CTSC-202ENST00000393301 ZCCHC17Q9NP64 241 aaKnown RBP15.42■□□□□ 0.06
CTSC-202ENST00000393301 COPRSQ9NQ92 184 aa15.42■□□□□ 0.06
CTSC-202ENST00000393301 IQSEC3Q9UPP2 1182 aaPredicted RBP15.42■□□□□ 0.06
CTSC-202ENST00000393301 PDS5AQ29RF7 1337 aaKnown RBP15.42■□□□□ 0.06
CTSC-202ENST00000393301 SPDYE5A6NIY4 337 aa15.41■□□□□ 0.06
CTSC-202ENST00000393301 TCP10L2B9ZVM9 353 aa15.41■□□□□ 0.06
CTSC-202ENST00000393301 SOX10P56693 466 aa15.41■□□□□ 0.06
CTSC-202ENST00000393301 CHAF1AQ13111 956 aaPredicted RBP15.41■□□□□ 0.06
CTSC-202ENST00000393301 MTX1Q13505 466 aa15.41■□□□□ 0.06
CTSC-202ENST00000393301 VGLL4Q14135 290 aa15.41■□□□□ 0.06
CTSC-202ENST00000393301 OPTNQ96CV9 577 aa15.41■□□□□ 0.06
CTSC-202ENST00000393301 FRAT2O75474 233 aaPredicted RBP15.4■□□□□ 0.06
CTSC-202ENST00000393301 IL15P40933 162 aaPredicted RBP15.4■□□□□ 0.06
CTSC-202ENST00000393301 RARSP54136 660 aaKnown RBP15.4■□□□□ 0.06
CTSC-202ENST00000393301 CRHR2Q13324 411 aa15.4■□□□□ 0.06
CTSC-202ENST00000393301 INTS3Q68E01 1043 aaKnown RBP15.4■□□□□ 0.06
CTSC-202ENST00000393301 OTOP1Q7RTM1 612 aa15.4■□□□□ 0.06
CTSC-202ENST00000393301 ERO1AQ96HE7 468 aa15.4■□□□□ 0.06
CTSC-202ENST00000393301 TMOD2Q9NZR1 351 aa15.4■□□□□ 0.06
CTSC-202ENST00000393301 RFX7Q2KHR2 1363 aa15.39■□□□□ 0.05
CTSC-202ENST00000393301 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
CTSC-202ENST00000393301 GTF2A2P52657 109 aa15.39■□□□□ 0.05
CTSC-202ENST00000393301 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
CTSC-202ENST00000393301 BRI3BPQ8WY22 251 aa15.39■□□□□ 0.05
CTSC-202ENST00000393301 ELP3Q9H9T3 547 aa15.39■□□□□ 0.05
CTSC-202ENST00000393301 NOB1Q9ULX3 412 aaKnown RBP15.39■□□□□ 0.05
CTSC-202ENST00000393301 SNCAIPQ9Y6H5 919 aa15.39■□□□□ 0.05
CTSC-202ENST00000393301 DOCK2Q92608 1830 aa15.38■□□□□ 0.05
CTSC-202ENST00000393301 ERO1BQ86YB8 467 aa15.38■□□□□ 0.05
CTSC-202ENST00000393301 FAM151AQ8WW52 585 aa15.38■□□□□ 0.05
CTSC-202ENST00000393301 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms