RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 MAP7Q14244 749 aa16.79■□□□□ 0.28
EXT1-201ENST00000378204 CCDC38Q502W7 563 aa16.79■□□□□ 0.28
EXT1-201ENST00000378204 JAKMIP2Q96AA8 810 aa16.79■□□□□ 0.28
EXT1-201ENST00000378204 FAM114A2Q9NRY5 505 aa16.79■□□□□ 0.28
EXT1-201ENST00000378204 MKRN1Q9UHC7 482 aaKnown RBP16.78■□□□□ 0.28
EXT1-201ENST00000378204 NMIQ13287 307 aaPredicted RBP16.78■□□□□ 0.28
EXT1-201ENST00000378204 RAB3IL1Q8TBN0 382 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 NIP7Q9Y221 180 aaKnown RBP eCLIP16.78■□□□□ 0.28
EXT1-201ENST00000378204 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
EXT1-201ENST00000378204 RGS22Q8NE09 1264 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 TSGA10Q9BZW7 698 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 DUOX2Q9NRD8 1548 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 ARFGAP2Q8N6H7 521 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 ARL1P40616 181 aaPredicted RBP16.78■□□□□ 0.28
EXT1-201ENST00000378204 MSANTD4Q8NCY6 345 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 PRIM1P49642 420 aaKnown RBP16.78■□□□□ 0.28
EXT1-201ENST00000378204 VAV2P52735 878 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 ZNF354CQ86Y25 554 aa16.78■□□□□ 0.28
EXT1-201ENST00000378204 EEF2P13639 858 aaKnown RBP16.77■□□□□ 0.28
EXT1-201ENST00000378204 GBP1P32455 592 aa16.77■□□□□ 0.28
EXT1-201ENST00000378204 CREB3L3Q68CJ9 461 aa16.77■□□□□ 0.28
EXT1-201ENST00000378204 CEBPAP49715 358 aaPredicted RBP16.77■□□□□ 0.28
EXT1-201ENST00000378204 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.28
EXT1-201ENST00000378204 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
EXT1-201ENST00000378204 IQUBQ8NA54 791 aa16.77■□□□□ 0.28
EXT1-201ENST00000378204 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.77■□□□□ 0.28
EXT1-201ENST00000378204 PLCB3Q01970 1234 aa16.77■□□□□ 0.27
EXT1-201ENST00000378204 EFCC1Q9HA90 598 aa16.77■□□□□ 0.27
EXT1-201ENST00000378204 SMC6Q96SB8 1091 aa16.77■□□□□ 0.27
EXT1-201ENST00000378204 TXNDC16Q9P2K2 825 aa16.77■□□□□ 0.27
EXT1-201ENST00000378204 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.27
EXT1-201ENST00000378204 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.27
EXT1-201ENST00000378204 PICALMQ13492 652 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 RUFY3Q7L099 469 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 AK2P54819 239 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 VCX3BQ9H321 246 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 DCTPP1Q9H773 170 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 F8W031 263 aaPredicted RBP16.76■□□□□ 0.27
EXT1-201ENST00000378204 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■□□□□ 11.3
EXT1-201ENST00000378204 ZC3H12CQ9C0D7 883 aaKnown RBP16.76■□□□□ 0.27
EXT1-201ENST00000378204 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 MCM7P33993 719 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 CNGA4Q8IV77 575 aa16.76■□□□□ 0.27
EXT1-201ENST00000378204 RNF113AO15541 343 aaKnown RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 MRPS9P82933 396 aaKnown RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 RAB3GAP1Q15042 981 aa16.75■□□□□ 0.27
EXT1-201ENST00000378204 FBLN1P23142 703 aa16.75■□□□□ 0.27
EXT1-201ENST00000378204 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 CCDC63Q8NA47 563 aa16.75■□□□□ 0.27
EXT1-201ENST00000378204 GUCA1BQ9UMX6 200 aa16.75■□□□□ 0.27
EXT1-201ENST00000378204 ZWINTO95229 277 aa16.75■□□□□ 0.27
EXT1-201ENST00000378204 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 TSPYL2Q9H2G4 693 aaPredicted RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 MTRF1LQ9UGC7 380 aaKnown RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
EXT1-201ENST00000378204 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 UTP14CQ5TAP6 766 aaKnown RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 SOS1Q07889 1333 aaPredicted RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 RPL13P26373 211 aaKnown RBP16.75■□□□□ 0.27
EXT1-201ENST00000378204 CCDC14Q49A88 953 aa16.75■□□□□ 0.27
EXT1-201ENST00000378204 KIAA1524Q8TCG1 905 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 IFNKQ9P0W0 207 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 TNRQ92752 1358 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 TMEM110-MUSTN1A8MSY1 372 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 FAM76AQ8TAV0 307 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 NUP160Q12769 1436 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 TPTE2Q6XPS3 522 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 PPP1R2P41236 205 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 PFDN1O60925 122 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 APOBRQ0VD83 1088 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 CEP85Q6P2H3 762 aa16.74■□□□□ 0.27
EXT1-201ENST00000378204 PA2G4Q9UQ80 394 aaKnown RBP16.74■□□□□ 0.27
EXT1-201ENST00000378204 CASQ2O14958 399 aaPredicted RBP16.73■□□□□ 0.27
EXT1-201ENST00000378204 PDE1CQ14123 709 aaPredicted RBP16.73■□□□□ 0.27
EXT1-201ENST00000378204 HDXQ7Z353 690 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 CPLX4Q7Z7G2 160 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 MTUS1Q9ULD2 1270 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 CNPY4Q8N129 248 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 LZTFL1Q9NQ48 299 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 PLS1Q14651 629 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 STMN2Q93045 179 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 TNNI2P48788 182 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 MAP7D1Q3KQU3 841 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 CAPZA3Q96KX2 299 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 ELP1O95163 1332 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 ZNF569Q5MCW4 686 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 MIER3Q7Z3K6 550 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 FRMD4BQ9Y2L6 1034 aa16.73■□□□□ 0.27
EXT1-201ENST00000378204 SBNO2Q9Y2G9 1366 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 RAD50Q92878 1312 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms