RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
TPM3-209ENST00000368527 PRIMPOLQ96LW4 560 aa11.92□□□□□ -0.5
TPM3-209ENST00000368527 MAP7D2Q96T17 732 aa11.92□□□□□ -0.5
TPM3-209ENST00000368527 PUS7LQ9H0K6 701 aaKnown RBP11.92□□□□□ -0.5
TPM3-209ENST00000368527 RNF41Q9H4P4 317 aaPredicted RBP11.92□□□□□ -0.5
TPM3-209ENST00000368527 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
TPM3-209ENST00000368527 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
TPM3-209ENST00000368527 NAP1L2Q9ULW6 460 aaPredicted RBP11.92□□□□□ -0.5
TPM3-209ENST00000368527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPM3-209ENST00000368527 NID2Q14112 1375 aa11.92□□□□□ -0.5
TPM3-209ENST00000368527 NUP98P52948 1817 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 GOLGA6L19H0YKK7 550 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
TPM3-209ENST00000368527 ZNF165P49910 485 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 CCT2P78371 535 aaKnown RBP11.91□□□□□ -0.5
TPM3-209ENST00000368527 SCARF1Q14162 830 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 SF3A1Q15459 793 aaKnown RBP11.91□□□□□ -0.5
TPM3-209ENST00000368527 ZRSR1Q15695 479 aaKnown RBP11.91□□□□□ -0.5
TPM3-209ENST00000368527 SARM1Q6SZW1 724 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 CCAR1Q8IX12 1150 aaKnown RBP11.91□□□□□ -0.5
TPM3-209ENST00000368527 SPATA5Q8NB90 893 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 MRPS27Q92552 414 aaKnown RBP11.91□□□□□ -0.5
TPM3-209ENST00000368527 SLC4A9Q96Q91 983 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
TPM3-209ENST00000368527 SPTLC3Q9NUV7 552 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 LAMB2P55268 1798 aa11.91□□□□□ -0.5
TPM3-209ENST00000368527 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
TPM3-209ENST00000368527 ZNF532Q9HCE3 1301 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 CCDC196A0A1B0GTZ2 297 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 TCRBV5S4A2TA0A5A2 114 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 UBAP1LF5GYI3 381 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 SH2B2O14492 632 aaPredicted RBP11.9□□□□□ -0.5
TPM3-209ENST00000368527 FOXP2O15409 715 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 RRP9O43818 475 aaKnown RBP11.9□□□□□ -0.5
TPM3-209ENST00000368527 NR1I2O75469 434 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 IDH1O75874 414 aaKnown RBP11.9□□□□□ -0.5
TPM3-209ENST00000368527 ME1P48163 572 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
TPM3-209ENST00000368527 COL9A3Q14050 684 aaPredicted RBP11.9□□□□□ -0.5
TPM3-209ENST00000368527 TRIM29Q14134 588 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 STK38Q15208 465 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 ANO6Q4KMQ2 910 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 TTLL5Q6EMB2 1281 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 FAM173BQ6P4H8 233 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
TPM3-209ENST00000368527 CEP57L1Q8IYX8 460 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 SYTL4Q96C24 671 aaPredicted RBP11.9□□□□□ -0.5
TPM3-209ENST00000368527 STRBPQ96SI9 672 aaKnown RBP11.9□□□□□ -0.5
TPM3-209ENST00000368527 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.9□□□□□ -0.5
TPM3-209ENST00000368527 CBX8Q9HC52 389 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
TPM3-209ENST00000368527 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.51
TPM3-209ENST00000368527 UBN2Q6ZU65 1347 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 NRAPQ86VF7 1730 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 LOC102724428A0A0B4J2F2 783 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 DYNC1I1O14576 645 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 SEMA3EO15041 775 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 MYO1BO43795 1136 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 CHGBP05060 677 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 APPP05067 770 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
TPM3-209ENST00000368527 SIK1P57059 783 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 TPM4P67936 248 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 TIGD1Q96MW7 591 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 USP28Q96RU2 1077 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 BPIFA3Q9BQP9 254 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 NAPBQ9H115 298 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 PIH1D3Q9NQM4 214 aaKnown RBP11.89□□□□□ -0.51
TPM3-209ENST00000368527 HPS5Q9UPZ3 1129 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 AKAP11Q9UKA4 1901 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
TPM3-209ENST00000368527 PDS5AQ29RF7 1337 aaKnown RBP11.88□□□□□ -0.51
TPM3-209ENST00000368527 SPATA31A5Q5VU36 1347 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 SPATA31A7Q8IWB4 1347 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 ERICH2A1L162 156 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 ZBTB43O43298 467 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 PPP6R2O75170 966 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 FDPSP14324 419 aaKnown RBP11.88□□□□□ -0.51
TPM3-209ENST00000368527 PHKA1P46020 1223 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 ANTXR2P58335 489 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 CHAF1AQ13111 956 aaPredicted RBP11.88□□□□□ -0.51
TPM3-209ENST00000368527 NOLC1Q14978 699 aaKnown RBP eCLIP11.88□□□□□ -0.51
TPM3-209ENST00000368527 MYSM1Q5VVJ2 828 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 PLA2G4DQ86XP0 818 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 ELOA2Q8IYF1 753 aaPredicted RBP11.88□□□□□ -0.51
TPM3-209ENST00000368527 FSIP1Q8NA03 581 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 LINC00301Q8NCQ3 95 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 ENGASEQ8NFI3 743 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
TPM3-209ENST00000368527 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
TPM3-209ENST00000368527 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
TPM3-209ENST00000368527 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 BECN2A8MW95 431 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 SPTLC2O15270 562 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms