RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZBTB24O43167 697 aaPredicted RBP17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 SDSP20132 328 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 NUCB1Q02818 461 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 TRPC3Q13507 836 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 E7EVH7 732 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 TUBB4AP04350 444 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 LRRC59Q96AG4 307 aaKnown RBP17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 TSGA10Q9BZW7 698 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 DYNC1I1O14576 645 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 CALCOCO2Q13137 446 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 RAPGEF1Q13905 1077 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 CNPY2Q9Y2B0 182 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 STK24Q9Y6E0 443 aa17.67■□□□□ 0.42
NUCKS1-201ENST00000367142 UFL1O94874 794 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 MEIS3Q99687 375 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 PDE1AP54750 535 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 PRPF31Q8WWY3 499 aaKnown RBP17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 PPP1R2P41236 205 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 TRIM6Q9C030 488 aaPredicted RBP17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 PFDN4Q9NQP4 134 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 HAUS2Q9NVX0 235 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 SYT1P21579 422 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 CEP128Q6ZU80 1094 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 M0QZ92 97 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 STK10O94804 968 aaKnown RBP17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 SKILP12757 684 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 SAP30BPQ9UHR5 308 aaKnown RBP17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 DCAF5Q96JK2 942 aa17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 NAP1L3Q99457 506 aaPredicted RBP17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
NUCKS1-201ENST00000367142 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 DAPK3O43293 454 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 ZSCAN23Q3MJ62 389 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 HELBQ8NG08 1087 aaPredicted RBP17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 CCDC169A6NNP5 214 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 TNNC1P63316 161 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 GEN1Q17RS7 908 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 KMT5BQ4FZB7 885 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 LINS1Q8NG48 757 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 ATRIPQ8WXE1 791 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 TCEANC2Q96MN5 208 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 DNAI1Q9UI46 699 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 PTPN23Q9H3S7 1636 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 BRAPQ7Z569 592 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 SUPT20HQ8NEM7 779 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 CCDC110Q8TBZ0 833 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 HCLS1P14317 486 aaPredicted RBP17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 KLHL40Q2TBA0 621 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 NACA2Q9H009 215 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 LIN9Q5TKA1 542 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 IQUBQ8NA54 791 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 FAM200AQ8TCP9 573 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 NOX5Q96PH1 765 aa17.65■□□□□ 0.42
NUCKS1-201ENST00000367142 CCT6AP40227 531 aaKnown RBP17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 HAUS3Q68CZ6 603 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 GLT8D2Q9H1C3 349 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 ARFGAP3Q9NP61 516 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 WDR97A6NE52 1622 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 F13A1P00488 732 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 SRRTQ9BXP5 876 aaKnown RBP17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 CCDC160A6NGH7 325 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 HDAC1Q13547 482 aaPredicted RBP17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 UHRF1BP1LA0JNW5 1464 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 TEX14Q8IWB6 1497 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 PRXQ9BXM0 1461 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 CALUO43852 315 aaPredicted RBP17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 PDE6BP35913 854 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 TCIRG1Q13488 830 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.41
NUCKS1-201ENST00000367142 ERCC5P28715 1186 aaPredicted RBP17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 PLCD1P51178 756 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 GPR161Q8N6U8 529 aaKnown RBP17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 LEO1Q8WVC0 666 aaPredicted RBP17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 ZBED4O75132 1171 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 TFCP2Q12800 502 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 GGA1Q9UJY5 639 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 JAG2Q9Y219 1238 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 CHMP2AO43633 222 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 GABPAQ06546 454 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 CCDC25Q86WR0 208 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 TUBB4BP68371 445 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 VWA3BQ502W6 1294 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 PRIMPOLQ96LW4 560 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 AZI2Q9H6S1 392 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 PARP10Q53GL7 1025 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 PPP1R21Q6ZMI0 780 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 CERS3Q8IU89 383 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 KCNK9Q9NPC2 374 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 LMTK3Q96Q04 1460 aa17.63■□□□□ 0.41
NUCKS1-201ENST00000367142 KRT9P35527 623 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 NSMCE1Q8WV22 266 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 SMIM23A6NLE4 172 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 SETDB1Q15047 1291 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 LETM2Q2VYF4 491 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 USP48Q86UV5 1035 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 CAPZA3Q96KX2 299 aa17.62■□□□□ 0.41
NUCKS1-201ENST00000367142 PLIN2Q99541 437 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms