RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CCDC87Q9NVE4 849 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 NIP7Q9Y221 180 aaKnown RBP eCLIP22.14■■□□□ 1.13
RFTN1-201ENST00000334133 SPEF2Q9C093 1822 aa22.14■■□□□ 1.13
RFTN1-201ENST00000334133 ERVV-1B6SEH8 477 aa22.13■■□□□ 1.13
RFTN1-201ENST00000334133 PRKAB2O43741 272 aa22.13■■□□□ 1.13
RFTN1-201ENST00000334133 DRC7Q8IY82 874 aa22.13■■□□□ 1.13
RFTN1-201ENST00000334133 NRBP1Q9UHY1 535 aa22.13■■□□□ 1.13
RFTN1-201ENST00000334133 KIF28PB7ZC32 967 aa22.13■■□□□ 1.13
RFTN1-201ENST00000334133 MBD4O95243 580 aa22.13■■□□□ 1.13
RFTN1-201ENST00000334133 C11orf57Q6ZUT1 292 aaPredicted RBP22.13■■□□□ 1.13
RFTN1-201ENST00000334133 MARCH10Q8NA82 808 aaPredicted RBP22.13■■□□□ 1.13
RFTN1-201ENST00000334133 ZNF396Q96N95 335 aaPredicted RBP22.13■■□□□ 1.13
RFTN1-201ENST00000334133 PYCARDQ9ULZ3 195 aa22.13■■□□□ 1.13
RFTN1-201ENST00000334133 NEDD4P46934 1319 aa22.13■■□□□ 1.13
RFTN1-201ENST00000334133 LOC102724428A0A0B4J2F2 783 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 SIK1P57059 783 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 TTF1Q15361 905 aaPredicted RBP22.12■■□□□ 1.13
RFTN1-201ENST00000334133 ZSCAN25Q6NSZ9 544 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 CCDC73Q6ZRK6 1079 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 TRIM5Q9C035 493 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 PCDHA7Q9UN72 937 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 PTGS1P23219 599 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 SNW1Q13573 536 aaKnown RBP22.12■■□□□ 1.13
RFTN1-201ENST00000334133 MIGA1Q8NAN2 632 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 TOMM22Q9NS69 142 aa22.12■■□□□ 1.13
RFTN1-201ENST00000334133 EVCP57679 992 aa22.11■■□□□ 1.13
RFTN1-201ENST00000334133 NOLC1Q14978 699 aaKnown RBP eCLIP22.11■■□□□ 1.13
RFTN1-201ENST00000334133 RRP12Q5JTH9 1297 aaKnown RBP22.11■■□□□ 1.13
RFTN1-201ENST00000334133 UTP14AQ9BVJ6 771 aaKnown RBP22.11■■□□□ 1.13
RFTN1-201ENST00000334133 SF3A1Q15459 793 aaKnown RBP22.11■■□□□ 1.13
RFTN1-201ENST00000334133 RBM43Q6ZSC3 357 aaKnown RBP22.11■■□□□ 1.13
RFTN1-201ENST00000334133 TICAM2Q86XR7 235 aa22.11■■□□□ 1.13
RFTN1-201ENST00000334133 STRBPQ96SI9 672 aaKnown RBP22.11■■□□□ 1.13
RFTN1-201ENST00000334133 ZKSCAN3Q9BRR0 538 aa22.11■■□□□ 1.13
RFTN1-201ENST00000334133 MYH3P11055 1940 aa22.11■■□□□ 1.13
RFTN1-201ENST00000334133 TCRBV5S4A2TA0A5A2 114 aa22.11■■□□□ 1.13
RFTN1-201ENST00000334133 FGFR2P21802 821 aa22.11■■□□□ 1.13
RFTN1-201ENST00000334133 ARID4AP29374 1257 aaPredicted RBP22.11■■□□□ 1.13
RFTN1-201ENST00000334133 UQCRHLA0A096LP55 91 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 UQCRHP07919 91 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 NFXL1Q6ZNB6 911 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 FBXO18Q8NFZ0 1043 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 EPB41L4AQ9HCS5 686 aaPredicted RBP22.1■■□□□ 1.13
RFTN1-201ENST00000334133 MYH7P12883 1935 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 KINO60870 393 aaKnown RBP22.1■■□□□ 1.13
RFTN1-201ENST00000334133 SLC5A1P13866 664 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 CDC27P30260 824 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 STK38Q15208 465 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 UBE3CQ15386 1083 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 BICDL1Q6ZP65 573 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 ANGEL1Q9UNK9 670 aaKnown RBP22.1■■□□□ 1.13
RFTN1-201ENST00000334133 TACC3Q9Y6A5 838 aa22.1■■□□□ 1.13
RFTN1-201ENST00000334133 PIBF1Q8WXW3 757 aa22.09■■□□□ 1.13
RFTN1-201ENST00000334133 TPM2P07951 284 aa22.09■■□□□ 1.13
RFTN1-201ENST00000334133 METAP2P50579 478 aaKnown RBP eCLIP22.09■■□□□ 1.13
RFTN1-201ENST00000334133 CCDC82Q8N4S0 544 aa22.09■■□□□ 1.13
RFTN1-201ENST00000334133 MROH5Q6ZUA9 1318 aa22.09■■□□□ 1.13
RFTN1-201ENST00000334133 DHX16O60231 1041 aaKnown RBP22.08■■□□□ 1.13
RFTN1-201ENST00000334133 CAMTA2O94983 1202 aa22.08■■□□□ 1.13
RFTN1-201ENST00000334133 UQCRFS1P1P0C7P4 283 aa22.08■■□□□ 1.13
RFTN1-201ENST00000334133 LRMPQ12912 555 aa22.08■■□□□ 1.13
RFTN1-201ENST00000334133 CCDC186Q7Z3E2 898 aa22.08■■□□□ 1.13
RFTN1-201ENST00000334133 NAPBQ9H115 298 aa22.08■■□□□ 1.13
RFTN1-201ENST00000334133 MARCKSP29966 332 aaPredicted RBP22.08■■□□□ 1.12
RFTN1-201ENST00000334133 NDUFA8P51970 172 aa22.08■■□□□ 1.12
RFTN1-201ENST00000334133 DOT1LQ8TEK3 1739 aa22.08■■□□□ 1.12
RFTN1-201ENST00000334133 ABCC12Q96J65 1359 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 SMIM22K7EJ46 135 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 IFNL3Q8IZI9 196 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 ZNF512BQ96KM6 892 aaPredicted RBP22.07■■□□□ 1.12
RFTN1-201ENST00000334133 SPATA31A1Q5TZJ5 1347 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 LCORLQ8N3X6 602 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 FBXL16Q8N461 479 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 ENGASEQ8NFI3 743 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 SDF4Q9BRK5 362 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 ABCF2Q9UG63 623 aa22.07■■□□□ 1.12
RFTN1-201ENST00000334133 SH2B2O14492 632 aaPredicted RBP22.06■■□□□ 1.12
RFTN1-201ENST00000334133 FAM160A1Q05DH4 1040 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 MAP3K12Q12852 859 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 APOA5Q6Q788 366 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 LINC00301Q8NCQ3 95 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 TSC1Q92574 1164 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 ALG1Q9BT22 464 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 ZSWIM5Q9P217 1185 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 TMEM67Q5HYA8 995 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 MYSM1Q5VVJ2 828 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 CMTR1Q8N1G2 835 aaKnown RBP22.06■■□□□ 1.12
RFTN1-201ENST00000334133 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 COL14A1Q05707 1796 aaKnown RBP22.06■■□□□ 1.12
RFTN1-201ENST00000334133 ANKRD36CQ5JPF3 1778 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 ROBO1Q9Y6N7 1651 aa22.06■■□□□ 1.12
RFTN1-201ENST00000334133 IGHMBP2P38935 993 aaKnown RBP22.05■■□□□ 1.12
RFTN1-201ENST00000334133 CHRNDQ07001 517 aa22.05■■□□□ 1.12
RFTN1-201ENST00000334133 SYNE3Q6ZMZ3 975 aa22.05■■□□□ 1.12
RFTN1-201ENST00000334133 FAM13BQ9NYF5 915 aa22.05■■□□□ 1.12
RFTN1-201ENST00000334133 RTEL1Q9NZ71 1219 aa22.05■■□□□ 1.12
RFTN1-201ENST00000334133 LRP2BPQ9P2M1 347 aa22.05■■□□□ 1.12
RFTN1-201ENST00000334133 COL16A1Q07092 1604 aaPredicted RBP22.05■■□□□ 1.12
RFTN1-201ENST00000334133 BIN1O00499 593 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms