RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Cap2Q9CYT6 476 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 NgdnQ9DB96 315 aaKnown RBP8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Xpo4Q9ESJ0 1151 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 GmnnO88513 206 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Gpr182P43142 395 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Paxbp1P58501 919 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cnnm2Q3TWN3 875 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Myl10Q62082 202 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Zfp397Q7TNK4 527 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Rnf41Q8BH75 317 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ppil4Q9CXG3 492 aaKnown RBP8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Col14a1Q80X19 1797 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Kcng1A2BDX4 514 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Trim59Q922Y2 403 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 CenpqQ9CPQ5 267 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Mrps25Q9D125 171 aaKnown RBP8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 SelenooQ9DBC0 667 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 WtapQ9ER69 396 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Bcl9Q9D219 1425 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Gm43638A0A0J9YU36 694 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Fbxl16A2RT62 479 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Capn2O08529 700 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Prl3d1P18121 224 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Pfkfb1P70266 471 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Sparcl1P70663 650 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Zbtb38Q3LR78 1197 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 ErmnQ5EBJ4 281 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Fam102bQ8BQS4 339 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 AbraQ8BUZ1 375 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ddx27Q921N6 760 aaKnown RBP8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Baiap2l1Q9DBJ3 514 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 IncenpQ9WU62 880 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Znf568E9PYI1 671 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cyp26a1O55127 497 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Slc4a1P04919 929 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Mtx1P47802 317 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Pald1P70261 859 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Exoc5Q3TPX4 708 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Pram1Q6BCL1 675 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ggt6Q6PDE7 497 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Spag5Q7TME2 1165 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 9230110C19RikQ8CC70 267 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Mylk2Q8VCR8 613 aa8.63□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Slc4a4O88343 1079 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Eva1cP58659 440 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Slc7a3P70423 618 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Lmbr1Q9JIT0 490 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Atp12aQ9Z1W8 1035 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Rimbp3Q3V0F0 1606 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Hmx1O70218 332 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ms4a1P19437 291 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Clca2Q8BG22 942 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tmem143Q8VD26 458 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Krt23Q99PS0 422 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ccdc96Q9CR92 584 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Dusp10Q9ESS0 483 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tbc1d8bA3KGB4 1114 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Vmn2r23E9PXI5 849 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Pcdhb9E9Q5G2 828 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Nfatc2ipO09130 412 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Rgs9O54828 675 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Sdc2P43407 202 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 PtprvP70289 1705 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ifit1bl2Q3U687 466 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Lamb3Q61087 1168 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tmco3Q8BH01 678 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Bola3Q8CEI1 110 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Nat10Q8K224 1024 aaKnown RBP8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Hps3Q91VB4 1002 aa8.62□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tcof1O08784 1320 aaKnown RBP8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Lipo1J3QME6 396 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cyp2d10P24456 504 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Irx2P81066 474 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Trim25Q61510 634 aaKnown RBP8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Arid5bQ8BM75 1188 aaKnown RBP8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Rtn1Q8K0T0 780 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Vps16Q920Q4 839 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Krt82Q99M74 516 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ube3bQ9ES34 1070 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Dennd3A2RT67 1274 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cyp26c1B2RXA7 518 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Card6E9PWH2 1175 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ift122Q6NWV3 1182 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tcp11l1Q8BTG3 509 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ccz1Q8C1Y8 480 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Klhl30Q8C3F7 581 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ufl1Q8CCJ3 793 aaKnown RBP8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ints5Q8CHT3 1018 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Emilin1Q99K41 1017 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cep89Q9CZX2 791 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Mei1Q9D4I2 1268 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Carmil3Q3UFQ8 1375 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Shank2Q80Z38 1476 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ktn1Q61595 1327 aaKnown RBP8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ccdc121E9Q6D3 323 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Snrpa1P57784 255 aaKnown RBP8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Plbd2Q3TCN2 594 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Luc7l2Q7TNC4 392 aaKnown RBP8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cfap69Q8BH53 942 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Telo2Q9DC40 840 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms