RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Cyp26a1O55127 497 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Nbr1P97432 988 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Il17raQ60943 864 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Ehd2Q8BH64 543 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Kcnq3Q8K3F6 873 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Emilin1Q99K41 1017 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Large1Q9Z1M7 756 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Shank3Q4ACU6 1730 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Arap2Q8BZ05 1703 aa14.93□□□□□ -0.02
Nup88-203ENSMUST00000108531 Cyp3a59D3Z2W7 503 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Ess2O70279 479 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Cyp2d9P11714 504 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Gpr182P43142 395 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Cplx2P84086 134 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 L1td1Q587J6 782 aaKnown RBP14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Prdm1Q60636 856 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Pcdhb14Q6PB90 796 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Gnl3lQ6PGG6 577 aaKnown RBP14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Zbtb43Q9DAI4 467 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Txnrd1Q9JMH6 613 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Sycp2lA0A0M3U1B0 842 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Lipo1J3QME6 396 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Me1P06801 572 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Anxa1P10107 346 aaKnown RBP14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Abcf1Q6P542 837 aaKnown RBP14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Ddx27Q921N6 760 aaKnown RBP14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Riok1Q922Q2 567 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Ube3bQ9ES34 1070 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Dctpp1Q9QY93 170 aa14.92□□□□□ -0.02
Nup88-203ENSMUST00000108531 Slc1a4O35874 532 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Cyp19a1P28649 503 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Paxbp1P58501 919 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Adam1aQ60813 791 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Vps37dQ810I0 261 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Bola3Q8CEI1 110 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 GptQ8QZR5 496 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Pcdhb9E9Q5G2 828 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Epha2Q03145 977 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Zbtb38Q3LR78 1197 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Nlrp9aQ66X03 949 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Mei4Q8BRM6 389 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Frat2Q8K025 231 aa14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Ccdc47Q9D024 483 aaKnown RBP14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 CoblQ5NBX1 1337 aaKnown RBP14.91□□□□□ -0.02
Nup88-203ENSMUST00000108531 Pde6aP27664 859 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Samsn1P57725 372 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Gas2l3Q3UWW6 683 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Usp13Q5BKP2 858 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 DymQ8CHY3 669 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Sil1Q9EPK6 465 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Nek3Q9R0A5 511 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Nav1Q8CH77 1875 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Med23Q80YQ2 1367 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 GmnnO88513 206 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Dnm1P39053 867 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Llgl2Q3TJ91 1027 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Smg7Q5RJH6 1138 aaKnown RBP14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Prpf4bQ61136 1007 aaKnown RBP14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Acap3Q6NXL5 833 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Tubb4aQ9D6F9 444 aa14.9□□□□□ -0.02
Nup88-203ENSMUST00000108531 Dapk3O54784 448 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 LtkP08923 888 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 Lrrc2Q8VDB8 371 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 Gpr108Q91WD0 569 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 MbipQ99LQ1 341 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 Krt84Q99M73 603 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 Cap2Q9CYT6 476 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 Prl3d1P18121 224 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 Tbc1d7Q9D0K0 293 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 Vnn1Q9Z0K8 512 aa14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ktn1Q61595 1327 aaKnown RBP14.89□□□□□ -0.03
Nup88-203ENSMUST00000108531 DccP70211 1447 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Naaladl2A0A0N4SUJ3 795 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Casp12O08736 419 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 PsdQ5DTT2 1024 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Mast3Q3U214 1321 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 HdgfP51859 237 aaKnown RBP14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Cep120Q7TSG1 988 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ranbp6Q8BIV3 1105 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Tcp11l1Q8BTG3 509 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Dnajc14Q921R4 703 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Gigyf1Q99MR1 1044 aaKnown RBP14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 Myo3bQ1EG27 1305 aa14.88□□□□□ -0.03
Nup88-203ENSMUST00000108531 PappaQ8R4K8 1624 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Myo1bP46735 1107 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Arhgef16Q3U5C8 713 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 NenfQ9CQ45 171 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Sept12Q9D451 317 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Rcan1Q9JHG6 198 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Atp12aQ9Z1W8 1035 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Lama4P97927 1816 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Epb41l2O70318 988 aaKnown RBP14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Sept1P42209 366 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Foxp1P58462 705 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ccnl1Q52KE7 532 aaKnown RBP14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Sptlc3Q8BG54 563 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 VmacQ8BP01 174 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Etf1Q8BWY3 437 aaKnown RBP14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ccdc150Q8CDI7 1110 aa14.87□□□□□ -0.03
Nup88-203ENSMUST00000108531 Ulbp1Q8HWA3 334 aa14.87□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms