RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 CerklA2AQH1 525 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Krtap4-2B1AQ85 167 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Fam124aD3Z5V4 536 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Wnt2bO70283 389 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Mmp20P57748 482 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Traf6P70196 530 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Tial1P70318 392 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Ddb1Q3U1J4 1140 aaKnown RBP9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Ppp2r1aQ76MZ3 589 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Q7TT23 1179 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Adamtsl4Q80T21 1036 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Robo4Q8C310 1012 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Spns2Q91VM4 549 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Osbpl3Q9DBS9 855 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Frmpd2A0A140LI67 1392 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Mst1rQ62190 1378 aa9.2□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Casz1Q9CWL2 1761 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 NeflP08551 543 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 CebpaP53566 359 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Cep70Q6IQY5 616 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Tmc6Q7TN60 810 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Sh2b1Q91ZM2 756 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Emilin1Q99K41 1017 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 ToporslQ9D2F8 683 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Chst7Q9EP78 484 aa9.19□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Itgb4A2A863 1818 aa9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Wisp1O54775 367 aa9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Znf629Q6A085 867 aa9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Mettl5Q8K1A0 209 aa9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Rab15Q8K386 212 aa9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Ccdc9Q8VC31 543 aaKnown RBP9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Gtf2e1Q9D0D5 440 aa9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 FancaQ9JL70 1439 aa9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Gyg1Q9R062 333 aa9.18□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Magea4F2Z493 315 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Csf2rbP26955 896 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 VgfQ0VGU4 617 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Dusp23Q6NT99 150 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Adam39Q7M762 756 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Prickle2Q80Y24 845 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Bsdc1Q80Y55 427 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Znf76Q8BMU0 568 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 GrhprQ91Z53 328 aa9.17□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 TnrQ8BYI9 1358 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 XdhQ00519 1335 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Grem1O70326 184 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Adamts8P57110 905 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Gja5Q01231 358 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Rnpc3Q3UZ01 514 aaKnown RBP9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 GpamQ61586 827 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Ltbp3Q61810 1268 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Sept9Q80UG5 583 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Pcdhb11Q91UZ8 797 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Polr3dQ91WD1 398 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Rwdd1Q9CQK7 243 aa9.16□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Nphp4P59240 1425 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Kcnb2A6H8H5 907 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Cyp2c68K7N6C2 491 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Zfpm1O35615 995 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Cyp2c40P56657 491 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Fam198bQ3UPI1 517 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Ccdc27Q3V036 639 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Hs3st6Q5GFD5 342 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 BcanQ61361 883 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Rftn1Q6A0D4 554 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Ppm1mQ8BU27 406 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Cdk19Q8BWD8 501 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Dhx32Q8BZS9 744 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 IqubQ8CDK3 788 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 BroxQ8K2Q7 411 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Amotl2Q8K371 772 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Prr13Q9CQJ5 137 aa9.15□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Tns2Q8CGB6 1400 aa9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Esx1O88933 382 aa9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 PdgfaP20033 211 aa9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Wnt10aP70701 417 aa9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Ralbp1Q62172 648 aa9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 RgmbQ7TQ33 436 aa9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Q8CC96 669 aa9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Afg3l2Q8JZQ2 802 aaKnown RBP9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Mtfr1lQ9CWE0 289 aa9.14□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Kif16bB1AVY7 1312 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Kdf1A2A9F4 397 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Gsg1l2M0QWL6 290 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Magea6O89010 325 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Tlr8P58682 1032 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Tmprss9P69525 1065 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 SpdyaQ5IBH7 310 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Magea3Q6T340 320 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Cep68Q8C0D9 733 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Ginm1Q91WR6 327 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Fmnl1Q9JL26 1094 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Rabgef1Q9JM13 491 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Dnajb8Q9QYI7 227 aa9.13□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Map7d1A2AJI0 846 aa9.12□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 CtskP55097 329 aa9.12□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Gpr162Q3UN16 588 aa9.12□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Slc13a5Q67BT3 572 aa9.12□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Usp40Q8BWR4 1235 aa9.12□□□□□ -0.95
Ccdc47-202ENSMUST00000106865 Mrps5Q99N87 432 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms