RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ATMQ13315 3056 aa9.88□□□□□ -0.83
USP6NL-206ENST00000609853 RAI1Q7Z5J4 1906 aaPredicted RBP9.88□□□□□ -0.83
USP6NL-206ENST00000609853 LAMA5O15230 3695 aa9.88□□□□□ -0.83
USP6NL-206ENST00000609853 CEBPZOSA8MTT3 80 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 NUPL2O15504 423 aaKnown RBP9.87□□□□□ -0.83
USP6NL-206ENST00000609853 SOX15O60248 233 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 ZG16O60844 167 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 GYPAP02724 150 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 ZNF134P52741 427 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 GNB2P62879 340 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 CCL8P80075 99 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 FBXL19-AS1Q494R0 122 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 PRR30Q53SZ7 412 aaPredicted RBP9.87□□□□□ -0.83
USP6NL-206ENST00000609853 DEFB108BQ8NET1 73 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 OR4A16Q8NH70 328 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 SFT2D1Q8WV19 159 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 MBD3L1Q8WWY6 194 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 DDB2Q92466 427 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 TAF15Q92804 592 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP6NL-206ENST00000609853 WFIKKN1Q96NZ8 548 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 OR4C12Q96R67 309 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 GAL3ST2Q9H3Q3 398 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 NDRG3Q9UGV2 375 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 FBXO7Q9Y3I1 522 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 PCNX1Q96RV3 2341 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 PPIAL4EA0A075B759 164 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 PPIAL4DF5H284 164 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 MBP02144 154 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 PPIAL4FP0DN26 164 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 PAX6P26367 422 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 NPBWR1P48145 328 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 KLRB1Q12918 225 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 VWC2Q2TAL6 325 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 CT45A1Q5HYN5 189 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 PRAMEF5Q5TYX0 476 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 ZNF429Q86V71 674 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 ZNF439Q8NDP4 499 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 CT45A3Q8NHU0 189 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 RPUSD1Q9UJJ7 312 aaKnown RBP9.87□□□□□ -0.83
USP6NL-206ENST00000609853 PPIAL4AQ9Y536 164 aa9.87□□□□□ -0.83
USP6NL-206ENST00000609853 TLN1Q9Y490 2541 aaKnown RBP9.86□□□□□ -0.83
USP6NL-206ENST00000609853 TMEM178BH3BS89 294 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 GPR37O15354 613 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 HSPB1P04792 205 aaKnown RBP9.86□□□□□ -0.83
USP6NL-206ENST00000609853 SELLP14151 372 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 CA7P43166 264 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 MRPS11P82912 194 aaKnown RBP9.86□□□□□ -0.83
USP6NL-206ENST00000609853 PMS2P11Q13670 270 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 EFNB3Q15768 340 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 KHDC3LQ587J8 217 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 RPL39P5Q59GN2 51 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 TMEM41BQ5BJD5 291 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 ZNF506Q5JVG8 444 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 OR8G2PQ6IF36 304 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 ADAM5Q6NVV9 412 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 FAM216BQ8N7L0 139 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 ST6GALNAC3Q8NDV1 305 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 OR10G4Q8NGN3 311 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 RNASE6Q93091 150 aaKnown RBP9.86□□□□□ -0.83
USP6NL-206ENST00000609853 RAB39BQ96DA2 213 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 ZNF251Q9BRH9 671 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 AIFM2Q9BRQ8 373 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 SMCO4Q9NRQ5 59 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 SLC25A10Q9UBX3 287 aaPredicted RBP9.86□□□□□ -0.83
USP6NL-206ENST00000609853 DOCK11Q5JSL3 2073 aa9.86□□□□□ -0.83
USP6NL-206ENST00000609853 TRGV8A0A0C4DH27 118 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 MEX3AA1L020 520 aaKnown RBP9.85□□□□□ -0.83
USP6NL-206ENST00000609853 PMS2P5A8MQ11 134 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 SHISA9B4DS77 424 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 B9A039 149 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 TMPRSS2O15393 492 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 NDUFA2O43678 99 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 IFNA17P01571 189 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 DAOP14920 347 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 APOBEC3AP31941 199 aaPredicted RBP9.85□□□□□ -0.83
USP6NL-206ENST00000609853 POU2AF1Q16633 256 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 SOHLH1Q5JUK2 328 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 SLC25A48Q6ZT89 311 aaKnown RBP9.85□□□□□ -0.83
USP6NL-206ENST00000609853 TCF23Q7RTU1 214 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 RSG1Q9BU20 258 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 GGACTQ9BVM4 153 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 RPRMQ9NS64 109 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 RFNGQ9Y644 331 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 BSNQ9UPA5 3926 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 H7C2Y5 167 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 SLC31A2O15432 143 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 F12P00748 615 aaPredicted RBP9.85□□□□□ -0.83
USP6NL-206ENST00000609853 HRASP01112 189 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 CD3EP07766 207 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 OR9G9P0C7N8 305 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
USP6NL-206ENST00000609853 NDUFB7P17568 137 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 CHRNB4P30926 498 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 LINC00205P59089 165 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 CCL20P78556 96 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 RHEBQ15382 184 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 CLDND2Q8NHS1 167 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 QTRT1Q9BXR0 403 aaKnown RBP9.85□□□□□ -0.83
USP6NL-206ENST00000609853 TUBA4BQ9H853 241 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms