RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ZFP30Q9Y2G7 519 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 MED13Q9UHV7 2174 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 LRP5LA4QPB2 252 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 TMPRSS2O15393 492 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 RBFOX2O43251 390 aaKnown RBP eCLIP20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 RAMP3O60896 148 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 SERF1AO75920 110 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 KRASP01116 189 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 RAB7AP51149 207 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 C11orf42Q8N5U0 333 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 DNAJC4Q9NNZ3 241 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 CLN8Q9UBY8 286 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 DEGS1O15121 323 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 TFF1P04155 84 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 ATP5G3P48201 142 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 GNG10P50151 68 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 ASCL3Q9NQ33 180 aa20.17■□□□□ 0.82
CSNK1E-203ENST00000396832 NCOR1O75376 2440 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 DNPH1O43598 174 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 SELENOTP62341 195 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 OR1L1Q8NH94 360 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 LIN7CQ9NUP9 197 aaKnown RBP20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 PDE6DO43924 150 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 LINC00205P59089 165 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 MSMO1Q15800 293 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 ATP6V1FQ16864 119 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 ARL6IP6Q8N6S5 226 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 ZNF709Q8N972 641 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 OR5AU1Q8NGC0 362 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 NPCDR1Q9BY65 106 aa20.16■□□□□ 0.82
CSNK1E-203ENST00000396832 CRISP2P16562 243 aa20.15■□□□□ 0.82
CSNK1E-203ENST00000396832 CBLN1P23435 193 aa20.15■□□□□ 0.82
CSNK1E-203ENST00000396832 G6PCP35575 357 aa20.15■□□□□ 0.82
CSNK1E-203ENST00000396832 LHX2P50458 406 aa20.15■□□□□ 0.82
CSNK1E-203ENST00000396832 APOBEC3DQ96AK3 386 aaPredicted RBP20.15■□□□□ 0.82
CSNK1E-203ENST00000396832 FAM90A26D6RGX4 464 aa20.15■□□□□ 0.82
CSNK1E-203ENST00000396832 PPP1R32Q7Z5V6 425 aa20.15■□□□□ 0.82
CSNK1E-203ENST00000396832 TRBV6-6A0A0A6YYG2 114 aa20.14■□□□□ 0.82
CSNK1E-203ENST00000396832 CYB561P49447 251 aa20.14■□□□□ 0.82
CSNK1E-203ENST00000396832 FBXW9Q5XUX1 488 aa20.14■□□□□ 0.82
CSNK1E-203ENST00000396832 TMPRSS7Q7RTY8 843 aa20.14■□□□□ 0.82
CSNK1E-203ENST00000396832 ZDHHC16Q969W1 377 aa20.14■□□□□ 0.82
CSNK1E-203ENST00000396832 CFAP47Q6ZTR5 3102 aa20.14■□□□□ 0.81
CSNK1E-203ENST00000396832 MDFIC2A0A1B0GVS7 189 aa20.14■□□□□ 0.81
CSNK1E-203ENST00000396832 ANKRD30BLA7E2S9 258 aa20.14■□□□□ 0.81
CSNK1E-203ENST00000396832 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.14■□□□□ 0.81
CSNK1E-203ENST00000396832 KITLGP21583 273 aa20.14■□□□□ 0.81
CSNK1E-203ENST00000396832 CHRNB4P30926 498 aa20.14■□□□□ 0.81
CSNK1E-203ENST00000396832 CDC34P49427 236 aaPredicted RBP20.14■□□□□ 0.81
CSNK1E-203ENST00000396832 OR10P1Q8NGE3 313 aa20.14■□□□□ 0.81
CSNK1E-203ENST00000396832 GFRA1P56159 465 aa20.13■□□□□ 0.81
CSNK1E-203ENST00000396832 OR5A2Q8NGI9 324 aa20.13■□□□□ 0.81
CSNK1E-203ENST00000396832 PPIAL4AQ9Y536 164 aa20.13■□□□□ 0.81
CSNK1E-203ENST00000396832 LNP1A1A4G5 178 aa20.13■□□□□ 0.81
CSNK1E-203ENST00000396832 RBMXL2O75526 392 aaKnown RBP20.13■□□□□ 0.81
CSNK1E-203ENST00000396832 ESDP10768 282 aa20.13■□□□□ 0.81
CSNK1E-203ENST00000396832 MMDQ15546 238 aa20.13■□□□□ 0.81
CSNK1E-203ENST00000396832 SAMD10Q9BYL1 202 aa20.13■□□□□ 0.81
CSNK1E-203ENST00000396832 F6UZH7 168 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 HNF1AP20823 631 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 COMPP49747 757 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 CXorf67Q86X51 503 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 BAGE3Q86Y29 109 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 BAGE2Q86Y30 109 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 DRAM1Q8N682 238 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 CIB3Q96Q77 187 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 FOXJ2Q9P0K8 574 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 HSPB7Q9UBY9 170 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 PMS2P5A8MQ11 134 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 MAFAQ8NHW3 353 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 SLC35E1Q96K37 410 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 MAGEA5P43359 124 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 MRPL18Q9H0U6 180 aaKnown RBP20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 MSL2Q9HCI7 577 aa20.12■□□□□ 0.81
CSNK1E-203ENST00000396832 GPR179Q6PRD1 2367 aa20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 TNRC6BQ9UPQ9 1833 aaKnown RBP20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 TRBV20OR9-2A0A075B6H5 130 aa20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 F2Z2F3 143 aa20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 OR2H2O95918 312 aa20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 WIPI2Q9Y4P8 454 aa20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 TNRC6AQ8NDV7 1962 aaKnown RBP20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 BOD1L1Q8NFC6 3051 aa20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 PLPPR2Q96GM1 343 aa20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 KCNIP2Q9NS61 270 aa20.11■□□□□ 0.81
CSNK1E-203ENST00000396832 PCSK5Q92824 1860 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 THBS3P49746 956 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 ZNF90Q03938 601 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 GCSAMLQ5JQS6 135 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 POM121L2Q96KW2 1035 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 TRAV38-1A0A0B4J264 116 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 MT-CO3P00414 261 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 GNG3P63215 75 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 CDX2Q99626 313 aaPredicted RBP20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 TMEM204Q9BSN7 226 aa20.1■□□□□ 0.81
CSNK1E-203ENST00000396832 OR10G8Q8NGN5 311 aa20.09■□□□□ 0.81
CSNK1E-203ENST00000396832 FAM103A1Q9BTL3 118 aaKnown RBP20.09■□□□□ 0.81
CSNK1E-203ENST00000396832 NPIPB11E5RHQ5 1161 aa20.09■□□□□ 0.81
CSNK1E-203ENST00000396832 CDIPTO14735 213 aa20.09■□□□□ 0.81
CSNK1E-203ENST00000396832 ZG16O60844 167 aa20.09■□□□□ 0.81
CSNK1E-203ENST00000396832 OR2D2Q9H210 308 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms