RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 UCP2P55851 309 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 PLP1P60201 277 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 ZNF826PQ6ZT77 177 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 OR5R1Q8NH85 324 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 NDUFAF3Q9BU61 184 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 FABP2P12104 132 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 PGLYRP4Q96LB8 373 aa13.62□□□□□ -0.23
COL17A1-202ENST00000369733 DPRXA6NFQ7 191 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 FAM157AC9JC47 383 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 CD5P06127 495 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 MAS1LP35410 378 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 SRSF9Q13242 221 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL17A1-202ENST00000369733 MUC15Q8N387 334 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 NPCDR1Q9BY65 106 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 PLAUP00749 431 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 FGF5P12034 268 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 UCP1P25874 307 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 RPL30P62888 115 aaKnown RBP13.61□□□□□ -0.23
COL17A1-202ENST00000369733 GFRALQ6UXV0 394 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 GCHFRP30047 84 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 HEPN1Q6WQI6 88 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 C18orf12Q96KH6 178 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 SCN2AQ99250 2005 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 PSME4Q14997 1843 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 MKRN2OSH3BPM6 223 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 STAG3L2P0CL84 134 aa13.61□□□□□ -0.23
COL17A1-202ENST00000369733 RIPPLY2Q5TAB7 128 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 IMMP2LQ96T52 175 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 COA4Q9NYJ1 87 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 PGPA6NDG6 321 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 BTF3P20290 206 aaKnown RBP13.6□□□□□ -0.23
COL17A1-202ENST00000369733 CEACAM3P40198 252 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 HERVK_113P61574 105 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 K7N7A8 449 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 P2RY6Q15077 328 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 ABHD12Q8N2K0 398 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 LCTP09848 1927 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 C8orf88P0DMB2 117 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 CENPWQ5EE01 88 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 SLC25A33Q9BSK2 321 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 MPV17P39210 176 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
COL17A1-202ENST00000369733 DLL1O00548 723 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 FAM117AQ9C073 453 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 WNT10AQ9GZT5 417 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 CYTL1Q9NRR1 136 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 CD40P25942 277 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 HSPE1P61604 102 aaKnown RBP13.59□□□□□ -0.23
COL17A1-202ENST00000369733 ZNF658BQ4V348 819 aaPredicted RBP13.59□□□□□ -0.23
COL17A1-202ENST00000369733 RAB37Q96AX2 223 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 FBLN5Q9UBX5 448 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 INSIG2Q9Y5U4 225 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 SELENOTP62341 195 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 PAQR4Q8N4S7 273 aaPredicted RBP13.59□□□□□ -0.23
COL17A1-202ENST00000369733 STPG3Q8N7X2 389 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 IL36BQ9NZH7 164 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 PLXNA1Q9UIW2 1896 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 H3BVH4 76 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 HLA-DRB1P01911 266 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 DPF1Q92782 380 aa13.59□□□□□ -0.23
COL17A1-202ENST00000369733 TBL2Q9Y4P3 447 aaKnown RBP13.59□□□□□ -0.23
COL17A1-202ENST00000369733 CHD5Q8TDI0 1954 aa13.58□□□□□ -0.23
COL17A1-202ENST00000369733 ZIC3O60481 467 aa13.58□□□□□ -0.23
COL17A1-202ENST00000369733 NPIPB7O75200 414 aa13.58□□□□□ -0.23
COL17A1-202ENST00000369733 TWIST1Q15672 202 aa13.58□□□□□ -0.23
COL17A1-202ENST00000369733 TMEM177Q53S58 311 aa13.58□□□□□ -0.23
COL17A1-202ENST00000369733 WFDC1Q9HC57 220 aa13.58□□□□□ -0.23
COL17A1-202ENST00000369733 AP5S1Q9NUS5 200 aa13.58□□□□□ -0.23
COL17A1-202ENST00000369733 AUP1Q9Y679 476 aa13.58□□□□□ -0.23
COL17A1-202ENST00000369733 BRCA1P38398 1863 aaKnown RBP13.58□□□□□ -0.24
COL17A1-202ENST00000369733 SLC17A3O00476 420 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 SSTR5P35346 364 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 RPL23P62829 140 aaKnown RBP13.58□□□□□ -0.24
COL17A1-202ENST00000369733 TFF3Q07654 80 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 PPIHO43447 177 aaKnown RBP13.58□□□□□ -0.24
COL17A1-202ENST00000369733 GCSAMQ8N6F7 178 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 ZDHHC16Q969W1 377 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 SSBP3Q9BWW4 388 aaPredicted RBP13.58□□□□□ -0.24
COL17A1-202ENST00000369733 DNAJC4Q9NNZ3 241 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 TCF19Q9Y242 345 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 TMEM189A5PLL7 270 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 ZNF716A6NP11 495 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 OR4A8P0C604 315 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 RPL31P62899 125 aaKnown RBP13.58□□□□□ -0.24
COL17A1-202ENST00000369733 HOXA4Q00056 320 aaPredicted RBP13.58□□□□□ -0.24
COL17A1-202ENST00000369733 KHDC1LQ5JSQ8 128 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 TMEM170AQ8WVE7 144 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 DUSP15Q9H1R2 295 aaPredicted RBP13.58□□□□□ -0.24
COL17A1-202ENST00000369733 ZNF430Q9H8G1 570 aaPredicted RBP13.58□□□□□ -0.24
COL17A1-202ENST00000369733 MYOFQ9NZM1 2061 aa13.58□□□□□ -0.24
COL17A1-202ENST00000369733 CCL20P78556 96 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 DCAF10Q5QP82 559 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 VKORC1L1Q8N0U8 176 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 TMEM56-RWDD3S4R434 201 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 KRTCAP3Q53RY4 240 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 ZNF525Q8N782 197 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 MIEN1Q9BRT3 115 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 A0A1W2PRD5 423 aa13.57□□□□□ -0.24
COL17A1-202ENST00000369733 A0A1W2PRF3 423 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms