RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 PPP1R3CQ9UQK1 317 aa13.71□□□□□ -0.21
CCDC8-201ENST00000307522 TBL2Q9Y4P3 447 aaKnown RBP13.71□□□□□ -0.21
CCDC8-201ENST00000307522 RBM7Q9Y580 266 aaKnown RBP13.71□□□□□ -0.21
CCDC8-201ENST00000307522 SLC22A20A6NK97 555 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 FOXG1P55316 489 aaPredicted RBP13.71□□□□□ -0.22
CCDC8-201ENST00000307522 TFF3Q07654 80 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 MALLQ13021 153 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 IGFBP7Q16270 282 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 OSR2Q8N2R0 312 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 SIGLECL1Q8N7X8 197 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 RCHY1Q96PM5 261 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 MRPL18Q9H0U6 180 aaKnown RBP13.71□□□□□ -0.22
CCDC8-201ENST00000307522 MOB1AQ9H8S9 216 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 NCOR2Q9Y618 2525 aa13.71□□□□□ -0.22
CCDC8-201ENST00000307522 MT-CO3P00414 261 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 GUCA1AP43080 201 aaPredicted RBP13.7□□□□□ -0.22
CCDC8-201ENST00000307522 CYB561P49447 251 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 FBLN7Q53RD9 439 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 LINC01551Q86U37 167 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 OR10G9Q8NGN4 311 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 OR10G7Q8NGN6 311 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 TRAV38-1A0A0B4J264 116 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 FCN1O00602 326 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 CLDN1O95832 211 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 RELBQ01201 579 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 ZNF90Q03938 601 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 DEFB127Q9H1M4 99 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 WDR54Q9H977 334 aa13.7□□□□□ -0.22
CCDC8-201ENST00000307522 DKK1O94907 266 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 PSG1P11464 419 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 MAGEA5P43359 124 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 TCL1AP56279 114 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 TMEM56Q96MV1 263 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 ZPBPQ9BS86 351 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 TMEM56-RWDD3S4R434 201 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 HLA-DRB5Q30154 266 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 KRTCAP3Q53RY4 240 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 ULBP2Q9BZM5 246 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 ELOVL5Q9NYP7 299 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 GNB1P62873 340 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 TAF15Q92804 592 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC8-201ENST00000307522 WDR61Q9GZS3 305 aaKnown RBP13.69□□□□□ -0.22
CCDC8-201ENST00000307522 HIPK2Q9H2X6 1198 aa13.69□□□□□ -0.22
CCDC8-201ENST00000307522 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
CCDC8-201ENST00000307522 SYNGR2O43760 224 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 LHX2P50458 406 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 OR10D3Q8NH80 312 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 FGFBP3Q8TAT2 258 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 ZNF596Q8TC21 504 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 OXGR1Q96P68 337 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 AGMATQ9BSE5 352 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 SPTAN1Q13813 2472 aaKnown RBP13.68□□□□□ -0.22
CCDC8-201ENST00000307522 TRBV20OR9-2A0A075B6H5 130 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 LOC102723996A0A087X1L8 192 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 CD300LBA8K4G0 201 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 CCL1P22362 96 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 ACP1P24666 158 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 CLDN15P56746 228 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 SLC38A11Q08AI6 406 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 ANAPC16Q96DE5 110 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 NEIL1Q96FI4 390 aaPredicted RBP13.68□□□□□ -0.22
CCDC8-201ENST00000307522 UHRF2Q96PU4 802 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 KALRNO60229 2985 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 PCSK5Q92824 1860 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 IGLC2P0DOY2 106 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 IGLC3P0DOY3 106 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 SRP14P37108 136 aaKnown RBP13.68□□□□□ -0.22
CCDC8-201ENST00000307522 TMEM164Q5U3C3 297 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 C12orf49Q9H741 205 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 ATP23Q9Y6H3 246 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 COX11Q9Y6N1 276 aa13.68□□□□□ -0.22
CCDC8-201ENST00000307522 SNURFLB1AK76 121 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 PGLYRP1O75594 196 aaPredicted RBP13.67□□□□□ -0.22
CCDC8-201ENST00000307522 KITLGP21583 273 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 LRRC75BQ2VPJ9 315 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 ABHD17BQ5VST6 288 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 FADS6Q8N9I5 356 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 ZNF738Q8NE65 137 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 FAM122AQ96E09 287 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 LRFN3Q9BTN0 628 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 EXPH5Q8NEV8 1989 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 IGKV1-6A0A0C4DH72 117 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 LOC102725191A0A1B0GVB3 256 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 NKX2-8O15522 239 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 OTX1P32242 354 aaPredicted RBP13.67□□□□□ -0.22
CCDC8-201ENST00000307522 PLGLB1Q02325 96 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 Q5PR19 223 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 GNB4Q9HAV0 340 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 NRN1Q9NPD7 142 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 CLN8Q9UBY8 286 aa13.67□□□□□ -0.22
CCDC8-201ENST00000307522 A8MXE2 369 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 PLCXD3Q63HM9 321 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 PP6455Q8WZ26 134 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 TLN1Q9Y490 2541 aaKnown RBP13.66□□□□□ -0.22
CCDC8-201ENST00000307522 HS3ST1O14792 307 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 PDCD6O75340 191 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 TYMSP04818 313 aa13.66□□□□□ -0.22
CCDC8-201ENST00000307522 DSCR4P56555 118 aaPredicted RBP13.66□□□□□ -0.22
CCDC8-201ENST00000307522 Q8N976 141 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms