RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 PCP4L1A6NKN8 68 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 TMEM178BH3BS89 294 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 AGAP20933 346 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 FGFRL1Q8N441 504 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 OR52L2PQ8NGH6 319 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 IL22RA2Q969J5 263 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 LYRM2Q9NU23 88 aaPredicted RBP16.81■□□□□ 0.28
SMG8-203ENST00000578922 SPTAN1Q13813 2472 aaKnown RBP16.81■□□□□ 0.28
SMG8-203ENST00000578922 LYNX1G3V0Z9 82 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 TNFSF12O43508 249 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 LYNX1P0DP58 116 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 FHITP49789 147 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 MEOX2P50222 304 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 C2CD4CQ8TF44 421 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 GALMQ96C23 342 aa16.81■□□□□ 0.28
SMG8-203ENST00000578922 DCHS2Q6V1P9 2916 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 IGHV3-43A0A0B4J1X8 118 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 ODAMA1E959 279 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 TMPRSS2O15393 492 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 IGHV3-43DP0DP04 118 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 VDAC1P21796 283 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 UCP1P25874 307 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 BAXQ07812 192 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 TEX36Q5VZQ5 186 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 SDSLQ96GA7 329 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 ZNF665Q9H7R5 613 aa16.8■□□□□ 0.28
SMG8-203ENST00000578922 RBM7Q9Y580 266 aaKnown RBP16.8■□□□□ 0.28
SMG8-203ENST00000578922 M0R036 132 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 SNRNP70P08621 437 aaKnown RBP16.79■□□□□ 0.28
SMG8-203ENST00000578922 VAMP2P63027 116 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 AKIRIN2Q53H80 203 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 ETV3LQ6ZN32 361 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 TMEM182Q6ZP80 229 aaPredicted RBP16.79■□□□□ 0.28
SMG8-203ENST00000578922 C1orf87Q8N0U7 546 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 ZFP82Q8N141 532 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 FAM213BQ8TBF2 198 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 ZNF462Q96JM2 2506 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 PPIAL4EA0A075B759 164 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 IGHV1-69-2A0A0G2JMI3 117 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 FAM24AA6NFZ4 105 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 PPIAL4DF5H284 164 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 PPIAL4FP0DN26 164 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 ZNF788Q6ZQV5 615 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 CMTM1Q8IZ96 169 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 OR10V1Q8NGI7 309 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 UNKLQ9H9P5 680 aaKnown RBP16.79■□□□□ 0.28
SMG8-203ENST00000578922 SEBOXQ9HB31 216 aaPredicted RBP16.79■□□□□ 0.28
SMG8-203ENST00000578922 PPIAL4AQ9Y536 164 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 COL12A1Q99715 3063 aa16.79■□□□□ 0.28
SMG8-203ENST00000578922 A0A1W2PPR1 153 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 IGSF23A1L1A6 192 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 C1QL1O75973 258 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 POLR2GP62487 172 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMG8-203ENST00000578922 CTAG1AP78358 180 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 ID3Q02535 119 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 CLINT1Q14677 625 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 NMSQ5H8A3 153 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 TMEM252Q8N6L7 170 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 OR5D13Q8NGL4 314 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 OR2G3Q8NGZ4 309 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 GNPNAT1Q96EK6 184 aaPredicted RBP16.78■□□□□ 0.28
SMG8-203ENST00000578922 TRAV38-1A0A0B4J264 116 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 NPIPB11E5RHQ5 1161 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 S100A8P05109 93 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 ATP6V0CP27449 155 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 PPP1CCP36873 323 aaKnown RBP16.78■□□□□ 0.28
SMG8-203ENST00000578922 LURAP1Q96LR2 239 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 KCNS2Q9ULS6 477 aa16.78■□□□□ 0.28
SMG8-203ENST00000578922 MYO18BQ8IUG5 2567 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 C5orf52A6NGY3 159 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 H0Y980 276 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 SOD3P08294 240 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 OMGP23515 440 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 S100GP29377 79 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 MALSU1Q96EH3 234 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 HIPK2Q9H2X6 1198 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 FBXO7Q9Y3I1 522 aa16.77■□□□□ 0.28
SMG8-203ENST00000578922 ADAM20O43506 726 aa16.77■□□□□ 0.27
SMG8-203ENST00000578922 LY6HO94772 140 aa16.77■□□□□ 0.27
SMG8-203ENST00000578922 S100A6P06703 90 aa16.77■□□□□ 0.27
SMG8-203ENST00000578922 AKR1C3P42330 323 aa16.77■□□□□ 0.27
SMG8-203ENST00000578922 RNF150Q9ULK6 438 aa16.77■□□□□ 0.27
SMG8-203ENST00000578922 NKX6-3A6NJ46 265 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 C15orf65H3BRN8 121 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 UBE2CO00762 179 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 SSSCA1O60232 199 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 NDUFB7P17568 137 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 COL8A2P25067 703 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 MAS1LP35410 378 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 PAX5Q02548 391 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 SOHLH1Q5JUK2 328 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 ZNF843Q8N446 348 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 NINJ1Q92982 152 aa16.76■□□□□ 0.27
SMG8-203ENST00000578922 SPINT2O43291 252 aa16.75■□□□□ 0.27
SMG8-203ENST00000578922 SLC25A6P12236 298 aa16.75■□□□□ 0.27
SMG8-203ENST00000578922 SULT1A1P50225 295 aa16.75■□□□□ 0.27
SMG8-203ENST00000578922 SNRPEP62304 92 aaKnown RBP16.75■□□□□ 0.27
SMG8-203ENST00000578922 LYPD2Q6UXB3 125 aa16.75■□□□□ 0.27
SMG8-203ENST00000578922 DPPA3Q6W0C5 159 aa16.75■□□□□ 0.27
SMG8-203ENST00000578922 KIAA1456Q9P272 454 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms