RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 LOC102723971A0A1B0GUV8 181 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 UBE2CO00762 179 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 GYPAP02724 150 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 RNF224P0DH78 156 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 ARL16Q0P5N6 197 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 RNPS1Q15287 305 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 PRR27Q6MZM9 219 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 R3HDM4Q96D70 268 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 S1PR3Q99500 378 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 TMEM147Q9BVK8 224 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 GFRA3O60609 400 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 AGAP20933 346 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 ID3Q02535 119 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 OR5P3Q8WZ94 311 aa13.71□□□□□ -0.21
PDZRN3-201ENST00000263666 LOC102723996A0A087X1L8 192 aa13.71□□□□□ -0.22
PDZRN3-201ENST00000263666 PARLQ9H300 379 aa13.71□□□□□ -0.22
PDZRN3-201ENST00000263666 RYDENQ9NUL5 291 aaKnown RBP13.71□□□□□ -0.22
PDZRN3-201ENST00000263666 C17orf98A8MV24 154 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 PTBP3O95758 552 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 SP1P08047 785 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 ZNF718Q3SXZ3 478 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 FAM201AQ5SY85 155 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 UHRF2Q96PU4 802 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 LY6G6EA0A0G2JKS1 128 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 C9orf172C9J069 976 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 NTN3O00634 580 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 TOX4O94842 621 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 SOD3P08294 240 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 APELAP0DMC3 54 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 ZNF506Q5JVG8 444 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 ACSM6Q6P461 480 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 SPSB3Q6PJ21 355 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 TMEM18Q96B42 140 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 TMEM56Q96MV1 263 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 PRO3102Q9H379 93 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 TMEM56-RWDD3S4R434 201 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 U3KQA8 63 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 A8MXE2 369 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 ENSAO43768 121 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 CYC1P08574 325 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 TOMM20LQ6UXN7 152 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 ACY3Q96HD9 319 aa13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 ZNF703Q9H7S9 590 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-201ENST00000263666 TRGV8A0A0C4DH27 118 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 GRIFINA4D1Z8 144 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 C1QTNF9BB2RNN3 333 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 IGHV3-48P01763 117 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 CD82P27701 267 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 SLC35E3Q7Z769 313 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 ABHD12Q8N2K0 398 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 TNCP24821 2201 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 B3GALT5-AS1P59052 145 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 COL10A1Q03692 680 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 SMIM21Q3B7S5 101 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 ANAPC10Q9UM13 185 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 WNT5AP41221 380 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 KRTDAPP60985 99 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 PNRC1Q12796 327 aaPredicted RBP13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 PROCRQ9UNN8 238 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 PIEZO1Q92508 2521 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 ODAMA1E959 279 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 H0Y8G0 127 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 IRF2P14316 349 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 ERVFC1-1P60608 527 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 HIST1H3AP68431 136 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 MIC13Q5XKP0 118 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 ZNF525Q8N782 197 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 SIRT7Q9NRC8 400 aa13.69□□□□□ -0.22
PDZRN3-201ENST00000263666 HOXA5P20719 270 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 SEMA5BQ9P283 1151 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 PRR33A8MZF0 331 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 C12orf77C9JDV5 145 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 GFRALQ6UXV0 394 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 SGMS2Q8NHU3 365 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 POM121L2Q96KW2 1035 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 WDR61Q9GZS3 305 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 TRAV34A0A0B4J273 112 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 NMSQ5H8A3 153 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 RND1Q92730 232 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 ADAMTS9Q9P2N4 1935 aa13.68□□□□□ -0.22
PDZRN3-201ENST00000263666 RPP30P78346 268 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 MOB1BQ7L9L4 216 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 OTOGLQ3ZCN5 2332 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 CTXND1A0A1B0GTU2 59 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 PMCHP20382 165 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 LHX2P50458 406 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 UCP2P55851 309 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 C10orf91Q5T1B1 145 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 ABLIM2Q6H8Q1 611 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 MOGAT3Q86VF5 341 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 LRTM2Q8N967 370 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 MS4A10Q96PG2 267 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 NEURL1O76050 574 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 IGKV1-5P01602 117 aa13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 CRYABP02511 175 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 CIB3Q96Q77 187 aaPredicted RBP13.67□□□□□ -0.22
PDZRN3-201ENST00000263666 MBP02144 154 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms