RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 LTB4R2Q9NPC1 389 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 A0A1W2PR48 441 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 GAGE2BQ13066 116 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 PRICKLE4Q2TBC4 344 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 GAGE2EQ4V326 116 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 OR8B12Q8NGG6 310 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 TMEM174Q8WUU8 243 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
POLR1A-201ENST00000263857 SMOC1Q9H4F8 434 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 METTL1Q9UBP6 276 aaKnown RBP5.9□□□□□ -1.46
POLR1A-201ENST00000263857 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.46
POLR1A-201ENST00000263857 SRSF4Q08170 494 aaKnown RBP5.9□□□□□ -1.47
POLR1A-201ENST00000263857 KIAA1644Q3SXP7 199 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 ZNF600Q6ZNG1 722 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 SHISA5Q8N114 240 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 OR2H1Q9GZK4 316 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 ALX4Q9H161 411 aaPredicted RBP5.9□□□□□ -1.47
POLR1A-201ENST00000263857 TNFRSF18Q9Y5U5 241 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 GPX1P07203 203 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 CA6P23280 308 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 MVDP53602 400 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 ELSPBP1Q96BH3 223 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 CHST5Q9GZS9 411 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 SSC5DA1L4H1 1573 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 ODAMA1E959 279 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 LEUTXA8MZ59 168 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 LOXL3P58215 753 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 HDHD3Q9BSH5 251 aaPredicted RBP5.9□□□□□ -1.47
POLR1A-201ENST00000263857 SF3B6Q9Y3B4 125 aaKnown RBP5.9□□□□□ -1.47
POLR1A-201ENST00000263857 FAM157AC9JC47 383 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 APOMO95445 188 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 PMVKQ15126 192 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 MESTQ5EB52 335 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 ZBP1Q9H171 429 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 TRBV23-1A0A0A0MS06 115 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 NPIPB8E9PQR5 432 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 NPIPB9F8W1W9 429 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 FGF17O60258 216 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 NPIPB7O75200 414 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 ZFPL1O95159 310 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 ZNF83P51522 516 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 TMEM50BP56557 158 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 PTCRAQ6ISU1 281 aaPredicted RBP5.9□□□□□ -1.47
POLR1A-201ENST00000263857 CGB2Q6NT52 195 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 HAPLN4Q86UW8 402 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 ZNF714Q96N38 554 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 SIGMAR1Q99720 223 aa5.9□□□□□ -1.47
POLR1A-201ENST00000263857 TMPRSS2O15393 492 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 PPYP01298 95 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 ZGLP1P0C6A0 271 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 PRSS53Q2L4Q9 553 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 ALKBH6Q3KRA9 238 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 WIPI1Q5MNZ9 446 aaPredicted RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 GPBAR1Q8TDU6 330 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 SDF2L1Q9HCN8 221 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 COX11Q9Y6N1 276 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 GFYI3L273 518 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 J3QT63 122 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 SIGLEC5O15389 551 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 ELOVL5Q9NYP7 299 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 SHISA7A6NL88 538 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 LSM6P62312 80 aaKnown RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 FOXC2Q99958 501 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 TMEM30AQ9NV96 361 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 PRKNO60260 465 aaPredicted RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 GALNSP34059 522 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 SERGEFQ9UGK8 458 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 COL11A1P12107 1806 aaPredicted RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 TNRC6AQ8NDV7 1962 aaKnown RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 LINC00869P0C866 280 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 LCN2P80188 198 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 ZNF880Q6PDB4 577 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 UNQ9370/PRO34162Q6UXP9 181 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 TCTN3Q6NUS6 607 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 MORN3Q6PF18 240 aaPredicted RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 HOXD4P09016 255 aaPredicted RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 EMDP50402 254 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 ISG20L2Q9H9L3 353 aaKnown RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 IGLV3-10A0A075B6K4 115 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 J3QR06 171 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 SYNGR3O43761 229 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 ZNF146Q15072 292 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 TMEM170BQ5T4T1 132 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 ZNF774Q6NX45 483 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 J3KRW8 73 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 SP9P0CG40 484 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 C9orf62Q8N4C0 152 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 QTRT1Q9BXR0 403 aaKnown RBP5.89□□□□□ -1.47
POLR1A-201ENST00000263857 LMO7DNF2Z398 122 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 MRGPRFQ96AM1 343 aa5.89□□□□□ -1.47
POLR1A-201ENST00000263857 ERGP11308 486 aa5.88□□□□□ -1.47
POLR1A-201ENST00000263857 POLR2GP62487 172 aaKnown RBP eCLIP5.88□□□□□ -1.47
POLR1A-201ENST00000263857 ZNF818PQ6ZRF7 136 aa5.88□□□□□ -1.47
POLR1A-201ENST00000263857 RIMKLAQ8IXN7 391 aa5.88□□□□□ -1.47
POLR1A-201ENST00000263857 GAPTQ8N292 157 aa5.88□□□□□ -1.47
POLR1A-201ENST00000263857 MPZL1O95297 269 aa5.88□□□□□ -1.47
POLR1A-201ENST00000263857 MALP21145 153 aa5.88□□□□□ -1.47
POLR1A-201ENST00000263857 B4GALNT1Q00973 533 aa5.88□□□□□ -1.47
POLR1A-201ENST00000263857 GUCA2AQ02747 115 aa5.88□□□□□ -1.47
POLR1A-201ENST00000263857 C1QTNF12Q5T7M4 302 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms