RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 A0A1W2PP11 408 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 OR2T8A6NH00 312 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 E9PLN8 166 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 K7EQM0 130 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 CDIPTO14735 213 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 NUPR1O60356 82 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 IGHG1P01857 330 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 SERPINA7P05543 415 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 CD59P13987 128 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 DUSP1P28562 367 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 PSG3Q16557 428 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 EMC4Q5J8M3 183 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 ACY3Q96HD9 319 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 FAM110AQ9BQ89 295 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 STRADBQ9C0K7 418 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 GEMIN7Q9H840 131 aaKnown RBP4.78□□□□□ -1.64
CPNE4-214ENST00000617767 MTFP1Q9UDX5 166 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TMEM212A6NML5 194 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 CLDN34H7C241 214 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TRAF3IP2O43734 574 aaPredicted RBP4.78□□□□□ -1.64
CPNE4-214ENST00000617767 ZIC3O60481 467 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TOX4O94842 621 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 ESDP10768 282 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 B4GALT1P15291 398 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 ARL3P36405 182 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 C2orf76Q3KRA6 126 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TCF24Q7RTU0 167 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 C5orf17Q8NAS9 161 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 NECAP1Q8NC96 275 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 OR2AE1Q8NHA4 323 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 ADAT3Q96EY9 351 aaPredicted RBP4.78□□□□□ -1.64
CPNE4-214ENST00000617767 NIPSNAP3BQ9BS92 247 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 UQCR10Q9UDW1 63 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 B3GALT5Q9Y2C3 310 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 LHFPL6Q9Y693 200 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 AKAP6Q13023 2319 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 PLCE1Q9P212 2302 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 KIAA1549Q9HCM3 1950 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 SPTBN1Q01082 2364 aaKnown RBP4.78□□□□□ -1.64
CPNE4-214ENST00000617767 A0A096LPE4 126 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TRAV1-2A0A0B4J238 106 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 A0A1W2PPZ6 126 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 PGPEP1LA6NFU8 196 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 FIGNL2A6NMB9 653 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TRAPPC2LH3BP13 241 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 HYPMO75409 117 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 AMY2AP04746 511 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TMEM225BP0DP42 221 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 LIFP15018 202 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 GNB3P16520 340 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 OTX1P32242 354 aaPredicted RBP4.78□□□□□ -1.64
CPNE4-214ENST00000617767 NTF4P34130 210 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 GUCA1AP43080 201 aaPredicted RBP4.78□□□□□ -1.64
CPNE4-214ENST00000617767 CYB561P49447 251 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 PPP1R1AQ13522 171 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 ALKBH6Q3KRA9 238 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 SPATA45Q537H7 98 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TUSC5Q8IXB3 177 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 OR1B1Q8NGR6 318 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 RNF128Q8TEB7 428 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 BANF2Q9H503 90 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 SRD5A3Q9H8P0 318 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TMEM106BQ9NUM4 274 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 MTCH1Q9NZJ7 389 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 CKLFQ9UBR5 152 aa4.78□□□□□ -1.64
CPNE4-214ENST00000617767 NXT1Q9UKK6 140 aaKnown RBP4.78□□□□□ -1.64
CPNE4-214ENST00000617767 TNRC6AQ8NDV7 1962 aaKnown RBP4.78□□□□□ -1.65
CPNE4-214ENST00000617767 TRBV24-1A0A075B6N3 115 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 TRBV6-7A0A0A0MS04 114 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 IGHV3-64DA0A0J9YX35 117 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 HSPB2A8KAH6 182 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 TAAR5O14804 337 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 HAND1O96004 215 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 MT-CO3P00414 261 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 CD55P08174 381 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 TIMP3P35625 211 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 ZNF121P58317 390 aaPredicted RBP4.77□□□□□ -1.65
CPNE4-214ENST00000617767 IL13RA1P78552 427 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 HSPB2Q16082 182 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 CCDC144NLQ6NUI1 221 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 Q6ZWC4 215 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 DTX1Q86Y01 620 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 SMIM20Q8N5G0 67 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 CYB561D1Q8N8Q1 229 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 GPER1Q99527 375 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 WDR54Q9H977 334 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 PLEK2Q9NYT0 353 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 WIPI2Q9Y4P8 454 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 SHANK1Q9Y566 2161 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 C3orf80F5H4A9 247 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 YPEL1O60688 119 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 SYNGR4O95473 234 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 ACP1P24666 158 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 MAGEA5P43359 124 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 GABRA2P47869 451 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 RAB11AP62491 216 aa4.77□□□□□ -1.65
CPNE4-214ENST00000617767 RPL23AP62750 156 aaKnown RBP4.77□□□□□ -1.65
CPNE4-214ENST00000617767 SLC35A1P78382 337 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms