RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 KCNS2Q9ULS6 477 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LAMP3Q9UQV4 416 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM56-RWDD3S4R434 201 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 DOCK11Q5JSL3 2073 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TRAV14DV4A0A0A6YYC5 116 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 IGHV3-43A0A0B4J1X8 118 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 RNF212BA8MTL3 300 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 MPTX1A8MV57 137 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TNFSF12O43508 249 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 RP2O75695 350 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 CDS2O95674 445 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 IGHV3-43DP0DP04 118 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 SLC25A4P12235 298 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 UCP1P25874 307 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 PSMB6P28072 239 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LOXL3P58215 753 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LTC4SQ16873 150 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM30BQ3MIR4 351 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 MORN2Q502X0 79 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 GGNBP1Q5YKI7 109 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 C11orf87Q6NUJ2 197 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM65Q6PI78 240 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LYPD2Q6UXB3 125 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LYZL2Q7Z4W2 148 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 ZNF695Q8IW36 515 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 DRAM1Q8N682 238 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 IL22RA2Q969J5 263 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 OR10C1Q96KK4 312 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 OR2D2Q9H210 308 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TAS2R3Q9NYW6 316 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LPAR3Q9UBY5 353 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 TMED3Q9Y3Q3 217 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 KLF2Q9Y5W3 355 aaPredicted RBP7.37□□□□□ -1.23
CCDC47-207ENST00000612558 LINC00312Q9Y6C7 94 aa7.37□□□□□ -1.23
CCDC47-207ENST00000612558 USP9XQ93008 2570 aaPredicted RBP7.36□□□□□ -1.23
CCDC47-207ENST00000612558 FXYD6-FXYD2A0A087WZ82 144 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 DUXBA0A1W2PPF3 345 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 LYNX1G3V0Z9 82 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 ITGB1BP1O14713 200 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 MPC2O95563 127 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 IGHV2-70P01814 119 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 LYNX1P0DP58 116 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 C4BPBP20851 252 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 RPL31P62899 125 aaKnown RBP7.36□□□□□ -1.23
CCDC47-207ENST00000612558 IFITM2Q01629 132 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 IL15RAQ13261 267 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 IAH1Q2TAA2 248 aaPredicted RBP7.36□□□□□ -1.23
CCDC47-207ENST00000612558 LRRC37A5PQ49AS3 106 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM268Q5VZI3 342 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 FAM53AQ6NSI3 398 aaPredicted RBP7.36□□□□□ -1.23
CCDC47-207ENST00000612558 TCF23Q7RTU1 214 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 SELENOHQ8IZQ5 122 aaKnown RBP7.36□□□□□ -1.23
CCDC47-207ENST00000612558 FGFRL1Q8N441 504 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 OR10A7Q8NGE5 316 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 OR52M1Q8NGK5 317 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 OR51H1Q8NH63 302 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 LHFPL5Q8TAF8 219 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 THAP6Q8TBB0 222 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 GPHA2Q96T91 129 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 AGMATQ9BSE5 352 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 GON7Q9BXV9 100 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 GAL3ST2Q9H3Q3 398 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 PLEKHF2Q9H8W4 249 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 UBTD1Q9HAC8 227 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 GFOD1Q9NXC2 390 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 GSKIPQ9P0R6 139 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 RNF150Q9ULK6 438 aa7.36□□□□□ -1.23
CCDC47-207ENST00000612558 YLPM1P49750 1951 aaKnown RBP7.36□□□□□ -1.23
CCDC47-207ENST00000612558 MALRD1Q5VYJ5 2156 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 DVL1O14640 695 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 ARPC5O15511 151 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 FCN3O75636 299 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 SERPINE2P07093 398 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 PET100P0DJ07 73 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 DAOP14920 347 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 VDAC1P21796 283 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 OMGP23515 440 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM200BQ69YZ2 307 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 ZNF546Q86UE3 836 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 SLC35G3Q8N808 338 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 RAB1CQ92928 201 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 RBPMSQ93062 196 aaKnown RBP7.35□□□□□ -1.23
CCDC47-207ENST00000612558 TIMD4Q96H15 378 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 SLA2Q9H6Q3 261 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 C19orf12Q9NSK7 152 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 LIN7CQ9NUP9 197 aaKnown RBP7.35□□□□□ -1.23
CCDC47-207ENST00000612558 IDI2-AS1Q9NZ38 188 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 CTSZQ9UBR2 303 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 PSG11Q9UQ72 335 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 FLNCQ14315 2725 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 AKAP6Q13023 2319 aa7.35□□□□□ -1.23
CCDC47-207ENST00000612558 L7N2F9 121 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 RPA2P15927 270 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 CXCL2P19875 107 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 GPR12P47775 334 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 RAB7AP51149 207 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 TMEM33P57088 247 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 CATR1Q13166 79 aa7.34□□□□□ -1.23
CCDC47-207ENST00000612558 EIF4EBP1Q13541 118 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 2063.2 ms