RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 LHX8Q68G74 356 aa11.43□□□□□ -0.58
COL1A2-213ENST00000620463 YRDCQ86U90 279 aaKnown RBP11.43□□□□□ -0.58
COL1A2-213ENST00000620463 FAM19A2Q8N3H0 131 aa11.43□□□□□ -0.58
COL1A2-213ENST00000620463 VSTM2LQ96N03 204 aa11.43□□□□□ -0.58
COL1A2-213ENST00000620463 TXNDC17Q9BRA2 123 aa11.43□□□□□ -0.58
COL1A2-213ENST00000620463 PSG11Q9UQ72 335 aa11.43□□□□□ -0.58
COL1A2-213ENST00000620463 ZNF638Q14966 1978 aaKnown RBP11.42□□□□□ -0.58
COL1A2-213ENST00000620463 SSC5DA1L4H1 1573 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 F2RP25116 425 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 EIF4EBP2Q13542 120 aaPredicted RBP11.42□□□□□ -0.58
COL1A2-213ENST00000620463 HES3Q5TGS1 186 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 TMEM108Q6UXF1 575 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 CNEP1R1Q8N9A8 125 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 TMEM56Q96MV1 263 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 NRN1Q9NPD7 142 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 PLA2G3Q9NZ20 509 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 H0YIG0 161 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 COL8A1P27658 744 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 PMELP40967 661 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 TMEM187Q14656 261 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 DNLZQ5SXM8 178 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 CYTL1Q9NRR1 136 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 TAAR3PQ9P1P4 343 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 APC2O95996 2303 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 LOC107984156A0A0G2JMH3 177 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 KLF4O43474 513 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 SNAI2O43623 268 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 SUMO3P55854 103 aaPredicted RBP11.42□□□□□ -0.58
COL1A2-213ENST00000620463 SRSF9Q13242 221 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL1A2-213ENST00000620463 LPAL2Q16609 132 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 TTC32Q5I0X7 151 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 ARL17AQ8IVW1 177 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 APOBEC4Q8WW27 367 aaKnown RBP11.42□□□□□ -0.58
COL1A2-213ENST00000620463 TMEM70Q9BUB7 260 aa11.42□□□□□ -0.58
COL1A2-213ENST00000620463 TMEM30CPA0ZSE6 113 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 DEFB108AA8MXU0 73 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 CXCL13O43927 109 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 NGFRP08138 427 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 UBE2V1Q13404 147 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 OR2W1Q9Y3N9 320 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 SPCS1Q9Y6A9 102 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 ZNF646O15015 1829 aaPredicted RBP11.41□□□□□ -0.58
COL1A2-213ENST00000620463 FOLR3P41439 243 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 GAS1P54826 345 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 GNG3P63215 75 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 TMEM240Q5SV17 173 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 OR5A2Q8NGI9 324 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 MARS2Q96GW9 593 aaKnown RBP11.41□□□□□ -0.58
COL1A2-213ENST00000620463 OR6C1Q96RD1 312 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 BOKQ9UMX3 212 aaPredicted RBP11.41□□□□□ -0.58
COL1A2-213ENST00000620463 TIMM9Q9Y5J7 89 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 HS3ST3B1Q9Y662 390 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 TRAV38-1A0A0B4J264 116 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 HRKO00198 91 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 ADH4P08319 380 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 ZNF32P17041 273 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 NPBWR2P48146 333 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 RPL23P62829 140 aaKnown RBP11.41□□□□□ -0.58
COL1A2-213ENST00000620463 SLC35E4Q6ICL7 350 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 FOXB1Q99853 325 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 ZNF391Q9UJN7 358 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 F11RQ9Y624 299 aaKnown RBP11.41□□□□□ -0.58
COL1A2-213ENST00000620463 MKRN2OSH3BPM6 223 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 HBZP02008 142 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 IL9P15248 144 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 RPL7P18124 248 aaKnown RBP11.41□□□□□ -0.58
COL1A2-213ENST00000620463 CXCL12P48061 93 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 TBC1D28Q2M2D7 210 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 TMEM116Q8NCL8 245 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 NDFIP1Q9BT67 221 aa11.41□□□□□ -0.58
COL1A2-213ENST00000620463 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 PATE4P0C8F1 98 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 BMI1P35226 326 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 DCDP81605 110 aaKnown RBP11.4□□□□□ -0.58
COL1A2-213ENST00000620463 SPTA1P02549 2419 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 TRIP12Q14669 1992 aaPredicted RBP11.4□□□□□ -0.58
COL1A2-213ENST00000620463 THY1P04216 161 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 AMY1AP04745 511 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 ZNF718Q3SXZ3 478 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 TCF23Q7RTU1 214 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 GBGT1Q8N5D6 347 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 GUCD1Q96NT3 240 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 BGLAPP02818 100 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 CD1BP29016 333 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 PQLC2Q6ZP29 291 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 DIRC2Q96SL1 478 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 NUDT16L1Q9BRJ7 211 aaKnown RBP11.4□□□□□ -0.58
COL1A2-213ENST00000620463 OCIAD1Q9NX40 245 aa11.4□□□□□ -0.58
COL1A2-213ENST00000620463 A0A1W2PPV9 198 aa11.39□□□□□ -0.59
COL1A2-213ENST00000620463 TMEM14DPA8MWL7 114 aa11.39□□□□□ -0.59
COL1A2-213ENST00000620463 H3BUT2 72 aa11.39□□□□□ -0.59
COL1A2-213ENST00000620463 ASAH2BP0C7U1 165 aa11.39□□□□□ -0.59
COL1A2-213ENST00000620463 LINC00869P0C866 280 aa11.39□□□□□ -0.59
COL1A2-213ENST00000620463 SPINK2P20155 84 aa11.39□□□□□ -0.59
COL1A2-213ENST00000620463 IZUMO4Q1ZYL8 232 aa11.39□□□□□ -0.59
COL1A2-213ENST00000620463 FNDC7Q5VTL7 733 aa11.39□□□□□ -0.59
COL1A2-213ENST00000620463 SIGMAR1Q99720 223 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms