RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GALMQ96C23 342 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 KIAA2026Q5HYC2 2103 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 TRBV6-6A0A0A6YYG2 114 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 TRIM64CA6NLI5 447 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 FOXI3A8MTJ6 420 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 M0QZK8 103 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 AIREO43918 545 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 TMEM127O75204 238 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 RGS11O94810 467 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 NAPSAO96009 420 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 IGHV3-7P01780 117 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 RAB7AP51149 207 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 TMEM50BP56557 158 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 KRTAP10-11P60412 298 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 HTD2P86397 168 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 ARL6IP1Q15041 203 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 UBALD1Q8TB05 177 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 SETD6Q8TBK2 473 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 TOMM40LQ969M1 308 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 RAB3CQ96E17 227 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 ARHGAP5-AS1Q96IT6 56 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 PECRQ9BY49 303 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 OR2S2Q9NQN1 319 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
SHKBP1-203ENST00000594298 IGHV3-43A0A0B4J1X8 118 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 SCGNO76038 276 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 IGHV3-43DP0DP04 118 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 SLC2A2P11168 524 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 MXD1Q05195 221 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 STEAP3Q658P3 488 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 SFXN4Q6P4A7 337 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 ZNF880Q6PDB4 577 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 C10orf99Q6UWK7 81 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 NR2C2APQ86WQ0 139 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 CROCCP3Q8IVE0 287 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 OR10R2Q8NGX6 335 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 YIPF6Q96EC8 236 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 CMSS1Q9BQ75 279 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 CENPOQ9BU64 300 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 C12orf4Q9NQ89 552 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 AK3Q9UIJ7 227 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 JPT1Q9UK76 154 aa13.92□□□□□ -0.18
SHKBP1-203ENST00000594298 WI2-2373I1.2A0A1W2PRP0 233 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 SMIM30A4D0T7 59 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 GAPDHP04406 335 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 CD3GP09693 182 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 SCAND1P57086 179 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 HMGN3Q15651 99 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 UTF1Q5T230 341 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 OR8H3Q8N146 312 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 LINC00482Q8N8I6 264 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 GPR61Q9BZJ8 451 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 ATG5Q9H1Y0 275 aa13.91□□□□□ -0.18
SHKBP1-203ENST00000594298 A0A1W2PPE3 182 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 YPEL1O60688 119 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 FAM106CPP0CH98 169 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 DEFB121Q5J5C9 76 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 KHDC1LQ5JSQ8 128 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 PLAC9Q5JTB6 97 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 LY6G6FQ5SQ64 297 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 C11orf87Q6NUJ2 197 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 SLC25A48Q6ZT89 311 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 THNSL2Q86YJ6 484 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 OR10V1Q8NGI7 309 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 YPEL2Q96QA6 119 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 RNF167Q9H6Y7 350 aa13.9□□□□□ -0.18
SHKBP1-203ENST00000594298 A0A0B4J203 849 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 FAM90A9PA6NNJ1 464 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 SERPINE3A8MV23 424 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 ZNF816Q0VGE8 651 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 PLA2G7Q13093 441 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 MORN2Q502X0 79 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 IDNKQ5T6J7 187 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 OR52L2PQ8NGH6 319 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 MOB4Q9Y3A3 225 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 ETV7Q9Y603 341 aa13.89□□□□□ -0.19
SHKBP1-203ENST00000594298 PSMB11A5LHX3 300 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 RAB27BO00194 218 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 HSD17B6O14756 317 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 TXNL1O43396 289 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 CLEC2LP0C7M8 214 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 HIST1H1DP16402 221 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 TALDO1P37837 337 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 ETV3LQ6ZN32 361 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 MRPL41Q8IXM3 137 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 ZNF439Q8NDP4 499 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 IL1F10Q8WWZ1 152 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 DPF1Q92782 380 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 Q9N2K0 584 aa13.88□□□□□ -0.19
SHKBP1-203ENST00000594298 A0A075B6Q4 140 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 SNRPBP14678 240 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 GNB3P16520 340 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 SLC6A1P30531 599 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 HOXD3P31249 432 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 HLA-DRB3P79483 266 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 ARFRP1Q13795 201 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 MOGAT2Q3SYC2 334 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms