RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 A0A1W2PQL4 384 aaPredicted RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 FUOMA2VDF0 154 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 DENRO43583 198 aaKnown RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 FSTL3O95633 263 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 NRASP01111 189 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 HRASP01112 189 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 KRASP01116 189 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 PDYNP01213 254 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 IFNA14P01570 189 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 IGLV7-43P04211 117 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 HMGN1P05114 100 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 IL6P05231 212 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 IGKV4-1P06312 121 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 GABRA1P14867 456 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 RPS12P25398 132 aaKnown RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 TGFBR1P36897 503 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 GNG10P50151 68 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 IDH3GP51553 393 aaPredicted RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 AP3S2P59780 193 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 KRTAP10-1P60331 282 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 SNAP25P60880 206 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 RAB5BP61020 215 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 RPS24P62847 133 aaKnown RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 DYNLL1P63167 89 aaKnown RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 HPCAP84074 193 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 FABP5Q01469 135 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 PPP1R1AQ13522 171 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 LY6EQ16553 131 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 NDUFA5Q16718 116 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 CCDC153Q494R4 210 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 TRMT12Q53H54 448 aaKnown RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 TMEM31Q5JXX7 168 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 N4BP2L1Q5TBK1 243 aaPredicted RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 SPOPLQ6IQ16 392 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 LCN8Q6JVE9 175 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 EBLN2Q6P2I7 272 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 TMEM144Q7Z5S9 345 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 DAZ4Q86SG3 579 aaKnown RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 LRP11Q86VZ4 500 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 ZFP82Q8N141 532 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 OSR2Q8N2R0 312 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 YIPF7Q8N8F6 280 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 FER1L6-AS1Q8NA97 138 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 TMEM161BQ8NDZ6 487 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 OR1P1Q8NH06 330 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 KCTD4Q8WVF5 259 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 APOBEC3DQ96AK3 386 aaPredicted RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 RAD51AP1Q96B01 352 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 CCDC42Q96M95 316 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 OR2V2Q96R30 315 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 SHANK2-AS3Q9BTD1 123 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 BCL2L14Q9BZR8 327 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 ALX4Q9H161 411 aaPredicted RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 C11orf49Q9H6J7 331 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 DAZ1Q9NQZ3 744 aaKnown RBP1.34□□□□□ -2.19
LMNB1-207ENST00000494185 DKKL1Q9UK85 242 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 ZNF835Q9Y2P0 537 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 TSPOAP1O95153 1857 aa1.34□□□□□ -2.19
LMNB1-207ENST00000494185 VWA8A3KMH1 1905 aa1.34□□□□□ -2.2
LMNB1-207ENST00000494185 DOCK9Q9BZ29 2069 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 RPRD2Q5VT52 1461 aaKnown RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 TRAV8-1A0A0A6YYK1 113 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SPRR5A0A1B0GTR4 108 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 C5orf49A4QMS7 147 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR5H14A6NHG9 310 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR6C70A6NIJ9 312 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 C16orf90A8MZG2 172 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 D6RAR5 112 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 PGRMC1O00264 195 aaKnown RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 NSA2O95478 260 aaKnown RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 GPR75O95800 540 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 IGLV3-27P01718 113 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 IFNA6P05013 189 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR4A8P0C604 315 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR4E1P0C645 316 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 CGB3P0DN86 165 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 CGB7P0DN87 165 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 CXCL2P19875 107 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 CDK2P24941 298 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 ALDH3A1P30838 453 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 HSPA9P38646 679 aaKnown RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OMPP47874 163 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR1E2P47887 323 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SERPINB9P50453 376 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 GABARAPL2P60520 117 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 ERVS71-1P61550 626 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 LSM6P62312 80 aaKnown RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 SLC35A2P78381 396 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 S100A12P80511 92 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 MRPS25P82663 173 aaKnown RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 REEP5Q00765 189 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 TMEM267Q0VDI3 215 aaPredicted RBP1.33□□□□□ -2.2
LMNB1-207ENST00000494185 OR2F1Q13607 317 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 MOBPQ13875 183 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 BATFQ16520 125 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 MESTQ5EB52 335 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 ACSBG2Q5FVE4 666 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 DNLZQ5SXM8 178 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
LMNB1-207ENST00000494185 LCE1BQ5T7P3 118 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms