RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GREM1O60565 184 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 PF4V1P10720 104 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 TMEM218A2RU14 115 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 PSMB2P49721 201 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 SIRT7Q9NRC8 400 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 STRCP1A6NGW2 1772 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 IGHV3-48P01763 117 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 SP9P0CG40 484 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 VSIG10L2P0DP72 767 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 OR5AC2Q9NZP5 309 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 KCNE5Q9UJ90 142 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 SNRNP200O75643 2136 aaKnown RBP16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 RAB29O14966 203 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 SCGB1D4Q6XE38 83 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 SEC11CQ9BY50 192 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 MYO16Q9Y6X6 1858 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 REG1AP05451 166 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 GUCA2BQ16661 112 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 TMEM183BQ1AE95 376 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 ANGPTL4Q9BY76 406 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 H3BQ15 152 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 FOXJ2Q9P0K8 574 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 KRTCAP3Q53RY4 240 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 CLEC2AQ6UVW9 174 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 METTL1Q9UBP6 276 aaKnown RBP16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 ARFGEF1Q9Y6D6 1849 aa16.16■□□□□ 0.18
SMARCC1-201ENST00000254480 LAMB2P55268 1798 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 LOC102724200A0A096LPH7 203 aaPredicted RBP16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 IGSF23A1L1A6 192 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 Q6ZN92 141 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 C7orf77A4D0Y5 90 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 SNURFLB1AK76 121 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 PPOXP50336 477 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 GSX1Q9H4S2 264 aaPredicted RBP16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 A0A1B0GU03 582 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 CD81P60033 236 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 IL36RNQ9UBH0 155 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 SPTA1P02549 2419 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 J3QR89 54 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 GCM2O75603 506 aaPredicted RBP16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 GFRA1P56159 465 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 DOLPP1Q86YN1 238 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 SNRNP40Q96DI7 357 aaKnown RBP16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 CACNA1IQ9P0X4 2223 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 C1QL1O75973 258 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 DPPA3Q6W0C5 159 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 PIKFYVEQ9Y2I7 2098 aa16.15■□□□□ 0.18
SMARCC1-201ENST00000254480 H3BTX0 84 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 COX6B1P14854 86 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 WDR73Q6P4I2 378 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 LIMS1P48059 325 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 IZUMO4Q1ZYL8 232 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 MRPL30Q8TCC3 161 aaKnown RBP16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 HIGD1AQ9Y241 93 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 MYOFQ9NZM1 2061 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 IGHV3-35A0A0C4DH35 117 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 ROM1Q03395 351 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 VKORC1L1Q8N0U8 176 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 CYB5R1Q9UHQ9 305 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 ZP4Q12836 540 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 SPANXN1Q5VSR9 72 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 TRAF4Q9BUZ4 470 aaPredicted RBP16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 CCDC88CQ9P219 2028 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 ARF6P62330 175 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 KHDC3LQ587J8 217 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 TCTEX1D1Q8N7M0 179 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 PAXXQ9BUH6 204 aa16.14■□□□□ 0.17
SMARCC1-201ENST00000254480 OR10J1P30954 320 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 CLPPQ16740 277 aaPredicted RBP16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 CXorf1O96002 111 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 GFRA3O60609 400 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 ADIPOR1Q96A54 375 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 PRDM14Q9GZV8 571 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 COX6A1P12074 109 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 SSTR5P35346 364 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 CEACAM18A8MTB9 384 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 PRR33A8MZF0 331 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 IFITM3Q01628 133 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 ZNF552Q9H707 407 aaPredicted RBP16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 LHFPL6Q9Y693 200 aa16.13■□□□□ 0.17
SMARCC1-201ENST00000254480 IGKV3D-11A0A0A0MRZ8 115 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 LOC101059948A0A1B0GTJ6 334 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 PRR19A6NJB7 356 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 IGKV3-11P04433 115 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 FGF12P61328 243 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 SGK494Q96LW2 274 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 MPV17P39210 176 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 SIGIRRQ6IA17 410 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 C19orf35Q6ZS72 473 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 LINC01560Q8TB33 94 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 KCNK17Q96T54 332 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 NPIPB8E9PQR5 432 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 RIGQ13278 110 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 CXorf66Q5JRM2 361 aaPredicted RBP16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 OR8G5Q8NG78 346 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 C5orf52A6NGY3 159 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 CDK2AP1O14519 115 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 FGF5P12034 268 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 TMPRSS3P57727 454 aa16.12■□□□□ 0.17
SMARCC1-201ENST00000254480 TWIST1Q15672 202 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms