RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 CA11O75493 328 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 NAPSAO96009 420 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 GZMHP20718 246 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 CD34P28906 385 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 C6orf183Q5T699 404 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 LDLRAD3Q86YD5 345 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 OR52L2PQ8NGH6 319 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 OR10V1Q8NGI7 309 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 PTX4Q96A99 478 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 SLC25A38Q96DW6 304 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 JMJD8Q96S16 334 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 CMSS1Q9BQ75 279 aaKnown RBP10.39□□□□□ -0.75
VEGFA-224ENST00000523873 MBNL3Q9NUK0 354 aaKnown RBP10.39□□□□□ -0.75
VEGFA-224ENST00000523873 RHBDL2Q9NX52 303 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 HILPDAQ9Y5L2 63 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 NF1P21359 2839 aa10.39□□□□□ -0.75
VEGFA-224ENST00000523873 A0A087X0M5 115 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 A0A1B0GX30 115 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 RNF212BA8MTL3 300 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 TRIM77I1YAP6 450 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 TOR1AO14656 332 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 HIST1H1DP16402 221 aaKnown RBP10.38□□□□□ -0.75
VEGFA-224ENST00000523873 IER3P46695 156 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 RPL5P46777 297 aaKnown RBP10.38□□□□□ -0.75
VEGFA-224ENST00000523873 LOXL3P58215 753 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 GNMTQ14749 295 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 HMGN3Q15651 99 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 FAM189A2Q15884 450 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 SSX2Q16385 188 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 HLA-DRB5Q30154 266 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 ZNF880Q6PDB4 577 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 IZUMO1Q8IYV9 350 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 DTX3Q8N9I9 347 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 BEND2Q8NDZ0 799 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 OR9G1Q8NH87 305 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 SLC25A46Q96AG3 418 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 CHIAQ9BZP6 476 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 DCSTAMPQ9H295 470 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 GFOD1Q9NXC2 390 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 KCNIP1Q9NZI2 227 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 PSG11Q9UQ72 335 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 TBL2Q9Y4P3 447 aaKnown RBP10.38□□□□□ -0.75
VEGFA-224ENST00000523873 ETV7Q9Y603 341 aa10.38□□□□□ -0.75
VEGFA-224ENST00000523873 H3BUX3 64 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 J3QR06 171 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 F2RL2O00254 374 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 SLC31A2O15432 143 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 SPINT2O43291 252 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 IGLV1-47P01700 117 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 CD3GP09693 182 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 HTR1DP28221 377 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 RAB13P51153 203 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 SPCS2Q15005 226 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 LY6EQ16553 131 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 KRTAP21-3Q3LHN1 58 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 TRAT1Q6PIZ9 186 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 OR10A7Q8NGE5 316 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 ZNF596Q8TC21 504 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 MAFIPQ8WZ33 124 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 SSX3Q99909 188 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 Q9N2K0 584 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 C12orf4Q9NQ89 552 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 ABRACLQ9P1F3 81 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 ZNF230Q9UIE0 474 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-224ENST00000523873 SCOCQ9UIL1 159 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 SPATA2Q9UM82 520 aa10.37□□□□□ -0.75
VEGFA-224ENST00000523873 TRBV6-6A0A0A6YYG2 114 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 RNASE1P07998 156 aaKnown RBP10.36□□□□□ -0.75
VEGFA-224ENST00000523873 SCTP09683 121 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 PRRX1P54821 245 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 HLA-DRB3P79483 266 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 ARFRP1Q13795 201 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 DIAPH2-AS1Q14236 149 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 LRRC75BQ2VPJ9 315 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 CDNFQ49AH0 187 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 CROCCP3Q8IVE0 287 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 SSMEM1Q8WWF3 244 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 MEGF9Q9H1U4 602 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 MMP28Q9H239 520 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 GNG12Q9UBI6 72 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
VEGFA-224ENST00000523873 TRAV18A0A075B6X5 111 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 TMEM235A6NFC5 223 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 LY6LH3BQJ8 138 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 BUB1B-PAK6H3BSN5 160 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 CLDN34H7C241 214 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 FCGR3AP08637 254 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 PTHLHP12272 177 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 PPP1CCP36873 323 aaKnown RBP10.35□□□□□ -0.75
VEGFA-224ENST00000523873 ZNF134P52741 427 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 SCAND1P57086 179 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 MRPS15P82914 257 aaKnown RBP10.35□□□□□ -0.75
VEGFA-224ENST00000523873 ZNF260Q3ZCT1 412 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 FBLN7Q53RD9 439 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 TPTE2P1Q5T6R2 138 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 C16orf87Q6PH81 154 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 MOB1BQ7L9L4 216 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 SAMD12Q8N8I0 201 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms