RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IGKV3-11P04433 115 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 GIG44P09565 113 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGKV1-13P0DP09 117 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CRISP2P16562 243 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAB5AP20339 215 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 PRKACBP22694 351 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 ME2P23368 584 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 HRH1P35367 487 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAB25P57735 213 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 TAS2R39P59534 338 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CCL8P80075 99 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 HMGCS1Q01581 520 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 STX5Q13190 355 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 MAD2L1BPQ15013 274 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 RPEL1Q2QD12 228 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 NCBP2-AS2Q69YL0 99 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 LCN12Q6JVE5 192 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 WDR82Q6UXN9 313 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 NPSR1Q6W5P4 371 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CCDC121Q6ZUS5 278 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 MBOAT2Q6ZWT7 520 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR2W3Q7Z3T1 314 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 MYPOPQ86VE0 399 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 TMEM61Q8N0U2 210 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 VKORC1L1Q8N0U8 176 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CBR4Q8N4T8 237 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR6Q1Q8NGQ2 317 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR6K6Q8NGW6 343 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR4S2Q8NH73 311 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR2V1Q8NHB1 315 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CD300LFQ8TDQ1 290 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 APH1BQ8WW43 257 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 DCUN1D4Q92564 292 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 DUS3LQ96G46 650 aaKnown RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 ALS2CR12Q96Q35 445 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 PYGO2Q9BRQ0 406 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 GABARAPL3Q9BY60 117 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 DSN1Q9H410 356 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 SLC7A10Q9NS82 523 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF256Q9Y2P7 627 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 VPS13DQ5THJ4 4388 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 DNAH2Q9P225 4427 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGHV1-18A0A0C4DH31 117 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGHV1-69-2A0A0G2JMI3 117 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF99A8MXY4 864 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HSBP1L1C9JCN9 74 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 KRTAP4-16G5E9R7 235 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 PLPP1O14494 284 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 PHOX2AO14813 284 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 SIVA1O15304 175 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HDAC3O15379 428 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ERI3O43414 337 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 PAHP00439 452 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 BGLAPP02818 100 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 OPN1SWP03999 348 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ERGP11308 486 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAB4AP20338 218 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF140P52738 457 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HERVK_113P61574 105 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 TBPL1P62380 186 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 MXD1Q05195 221 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 UNC119Q13432 240 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF726P1Q15940 193 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF239Q16600 458 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 EXOC3L4Q17RC7 722 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 KCTD19Q17RG1 926 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 C5orf64Q2M2E5 130 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 OTPQ5XKR4 325 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 CLEC6AQ6EIG7 209 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 PTRHD1Q6GMV3 140 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF774Q6NX45 483 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 THOC6Q86W42 341 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF101Q8IZC7 436 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 NT5CQ8TCD5 201 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HGDQ93099 445 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 RCN3Q96D15 328 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 GALNT14Q96FL9 552 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 TM2D3Q9BRN9 247 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF649Q9BS31 505 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ARMC7Q9H6L4 198 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF442Q9H7R0 627 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 NANOGQ9H9S0 305 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 VCX3AQ9NNX9 186 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ADA2Q9NZK5 511 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 MED11Q9P086 117 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HEY1Q9Y5J3 304 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 TNCP24821 2201 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGHV3-15A0A0B4J1V0 119 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 TCRBV4S1A1TA0A5B7 111 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 PRSS37A4D1T9 235 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR51F1A6NGY5 319 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 C17orf51A8MQB3 221 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 C4orf51C9J302 202 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 UGT2B11O75310 529 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 MPDU1O75352 247 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 SCELO95171 688 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 UTS2O95399 124 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 KLK1P06870 262 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 FGF8P55075 233 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms