RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 OR4D10Q8NGI6 311 aa18.9■□□□□ 0.62
IRF3-227ENST00000600911 C15orf40Q8WUR7 153 aa18.9■□□□□ 0.62
IRF3-227ENST00000600911 DACT3Q96B18 629 aaPredicted RBP18.9■□□□□ 0.62
IRF3-227ENST00000600911 RPUSD1Q9UJJ7 312 aaKnown RBP18.9■□□□□ 0.62
IRF3-227ENST00000600911 RBBP9O75884 186 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 MMP23AO75900 390 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 DLX1P56177 255 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 HMGN3Q15651 99 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 ESCO2Q56NI9 601 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 OR1L1Q8NH94 360 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 RFESDQ8TAC1 157 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 CCDC32Q9BV29 185 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 REG4Q9BYZ8 158 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 TAF9BQ9HBM6 251 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 IFT46Q9NQC8 304 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 MMP26Q9NRE1 261 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 ITGB1BP2Q9UKP3 347 aa18.89■□□□□ 0.62
IRF3-227ENST00000600911 LINC00854A0A1B0GVQ3 168 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 A8MXK9 166 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 UPK1BO75841 260 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 OMGP23515 440 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 DLX6P56179 175 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 KLF9Q13886 244 aaPredicted RBP18.89■□□□□ 0.61
IRF3-227ENST00000600911 CR1LQ2VPA4 569 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 IGSF11Q5DX21 431 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 STEAP3Q658P3 488 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 PRR18Q8N4B5 295 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 LY6G5BQ8NDX9 201 aa18.89■□□□□ 0.61
IRF3-227ENST00000600911 RIMS4Q9H426 269 aaPredicted RBP18.89■□□□□ 0.61
IRF3-227ENST00000600911 ANKRD20A5PA0PJZ0 165 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 M0QYG6 137 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 CD3DP04234 171 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 RCVRNP35243 200 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 NPY4RP50391 375 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 HLA-DRB3P79483 266 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 C11orf42Q8N5U0 333 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 C8orf46Q8TAG6 207 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 TINAGL1Q9GZM7 467 aaPredicted RBP18.88■□□□□ 0.61
IRF3-227ENST00000600911 NCOR1P1Q9H4R4 102 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 WNK2Q9Y3S1 2297 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 NOTCH2Q04721 2471 aa18.88■□□□□ 0.61
IRF3-227ENST00000600911 CELSR1Q9NYQ6 3014 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 MYO9AB2RTY4 2548 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 PMP2P02689 132 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 CBX5P45973 191 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 PRB3Q04118 309 aaPredicted RBP18.87■□□□□ 0.61
IRF3-227ENST00000600911 Q6ZS49 121 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 CORO2AQ92828 525 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 RAB39BQ96DA2 213 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 KIRREL1Q96J84 757 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 ANXA10Q9UJ72 324 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 TBC1D24Q9ULP9 559 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 LINC00312Q9Y6C7 94 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 ZANQ9Y493 2812 aa18.87■□□□□ 0.61
IRF3-227ENST00000600911 LOC105371242A0A075B767 164 aa18.86■□□□□ 0.61
IRF3-227ENST00000600911 PLA2G10O15496 165 aa18.86■□□□□ 0.61
IRF3-227ENST00000600911 HBZP02008 142 aa18.86■□□□□ 0.61
IRF3-227ENST00000600911 ZNF286AQ9HBT8 521 aa18.86■□□□□ 0.61
IRF3-227ENST00000600911 CALYQ9NYX4 217 aa18.86■□□□□ 0.61
IRF3-227ENST00000600911 TRDCB7Z8K6 153 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 SDCBPO00560 298 aaPredicted RBP18.85■□□□□ 0.61
IRF3-227ENST00000600911 FABP7O15540 132 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 HRH1P35367 487 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 RFX2P48378 723 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 MEF2CQ06413 473 aaPredicted RBP18.85■□□□□ 0.61
IRF3-227ENST00000600911 LOXL1Q08397 574 aaPredicted RBP18.85■□□□□ 0.61
IRF3-227ENST00000600911 LTC4SQ16873 150 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 TRIQKQ629K1 86 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 ARL11Q969Q4 196 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 OR6C3Q9NZP0 311 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 TRGV10A0A0A0MS01 117 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 TRBV23-1A0A0A0MS06 115 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 IGHV3-43A0A0B4J1X8 118 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 PPIAL4CA0A0B4J2A2 164 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 hADV38S2A0JD32 116 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 H7C1Q1 480 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 PPIAL4GP0DN37 164 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 IGHV3-43DP0DP04 118 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 ACTBP60709 375 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 ACTG1P63261 375 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 GNMTQ14749 295 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 SRSF7Q16629 238 aaKnown RBP eCLIP18.85■□□□□ 0.61
IRF3-227ENST00000600911 PRAMEF5Q5TYX0 476 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 ZNF57Q68EA5 555 aaPredicted RBP18.85■□□□□ 0.61
IRF3-227ENST00000600911 MOB1BQ7L9L4 216 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 TMEM229BQ8NBD8 167 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 OR4C16Q8NGL9 310 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 BORCS5Q969J3 196 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 PARP12Q9H0J9 701 aaKnown RBP18.85■□□□□ 0.61
IRF3-227ENST00000600911 OR1A1Q9P1Q5 309 aa18.85■□□□□ 0.61
IRF3-227ENST00000600911 FUOMA2VDF0 154 aa18.84■□□□□ 0.61
IRF3-227ENST00000600911 GPR37O15354 613 aa18.84■□□□□ 0.61
IRF3-227ENST00000600911 CD74P04233 296 aa18.84■□□□□ 0.61
IRF3-227ENST00000600911 TOMM5Q8N4H5 51 aa18.84■□□□□ 0.61
IRF3-227ENST00000600911 OR52L2PQ8NGH6 319 aa18.84■□□□□ 0.61
IRF3-227ENST00000600911 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.83■□□□□ 0.617e-9■■■■■ 31.8
IRF3-227ENST00000600911 KBTBD11-OT1A0A1B0GTJ5 212 aa18.83■□□□□ 0.61
IRF3-227ENST00000600911 FAM172BPA6NC97 362 aa18.83■□□□□ 0.61
IRF3-227ENST00000600911 NPIPB11E5RHQ5 1161 aa18.83■□□□□ 0.61
IRF3-227ENST00000600911 ZNF735P0CB33 412 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms