RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 RAB13P51153 203 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 HLA-DRB3P79483 266 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 NHLH2Q02577 135 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 PDCD1Q15116 288 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 GUK1Q16774 197 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 MIDNQ504T8 468 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 Q8IYB0 196 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 CMTM1Q8IZ96 169 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 TMEM252Q8N6L7 170 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 SUMF2Q8NBJ7 301 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 WNT2BQ93097 391 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 FER1L6-AS2Q96M78 137 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 HS3ST6Q96QI5 342 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 HES7Q9BYE0 225 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 OR51I2Q9H344 312 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 SMOC1Q9H4F8 434 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 ZNF552Q9H707 407 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 MLXQ9UH92 298 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 A0A1B0GU03 582 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 LNP1A1A4G5 178 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 MT-CO3P00414 261 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 F12P00748 615 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 NGFP01138 241 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 F2RP25116 425 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 S100GP29377 79 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 MAS1LP35410 378 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 MEOX1P50221 254 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 SRYQ05066 204 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 TCEAL6Q6IPX3 200 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 DPPA3Q6W0C5 159 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 NUFIP2Q7Z417 695 aaKnown RBP10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 ODF3L1Q8IXM7 274 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 FAM58AQ8N1B3 248 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 SECTM1Q8WVN6 248 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 TCEAL3Q969E4 200 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 GNPNAT1Q96EK6 184 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 ARRDC1-AS1Q9H2J1 176 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 BIN3Q9NQY0 253 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 OR2W1Q9Y3N9 320 aa10.68□□□□□ -0.7
ECHDC1-209ENST00000454591 FREM1Q5H8C1 2179 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 TECTAO75443 2155 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 TRAV24A0A0B4J272 114 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 FAM166BA8MTA8 275 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 HSPA12AO43301 675 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 PGLYRP1O75594 196 aaPredicted RBP10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 IL18BPO95998 194 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 SP9P0CG40 484 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 ITGA3P26006 1051 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 ID4P47928 161 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 ERVK11-1P61568 191 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 PLGLB1Q02325 96 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 CLN3Q13286 438 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 SLC10A1Q14973 349 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 FBXW9Q5XUX1 488 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 Q6P435 159 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 MEX3BQ6ZN04 569 aaKnown RBP10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 MCEMP1Q8IX19 187 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 RXFP4Q8TDU9 374 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 LSM10Q969L4 123 aaKnown RBP10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 WDYHV1Q96HA8 205 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 AKR1E2Q96JD6 320 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 DLL3Q9NYJ7 618 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 RNF115Q9Y4L5 304 aa10.67□□□□□ -0.7
ECHDC1-209ENST00000454591 FAM24AA6NFZ4 105 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 PROB1E7EW31 1015 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 ADAM20O43506 726 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 F10P00742 488 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 IFNA4P05014 189 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 PRKACAP17612 351 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 CD200P41217 278 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 POLR2GP62487 172 aaKnown RBP eCLIP10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 RHEBQ15382 184 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 NAXEQ8NCW5 288 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 SLC35B3Q9H1N7 401 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 ZDHHC11Q9H8X9 412 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 CCL28Q9NRJ3 127 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 GLRX2Q9NS18 164 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 IL36RNQ9UBH0 155 aa10.66□□□□□ -0.7
ECHDC1-209ENST00000454591 KIAA1324LA8MWY0 1029 aaPredicted RBP10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 AGPAT2O15120 278 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 CRYBA1P05813 215 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 CCL2P13500 99 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 CCNOP22674 350 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 NFYBP25208 207 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 ATP6V0CP27449 155 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 PAX9P55771 341 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 VAMP2P63027 116 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 TSC22D1Q15714 1073 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 ACSF3Q4G176 576 aaPredicted RBP10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 SPIN3Q5JUX0 258 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 C9orf135Q5VTT2 229 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 CLEC9AQ6UXN8 241 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 MALSU1Q96EH3 234 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 RAB40CQ96S21 281 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 RTL8AQ9BWD3 113 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 SH3BGRL3Q9H299 93 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 TAAR3PQ9P1P4 343 aa10.65□□□□□ -0.7
ECHDC1-209ENST00000454591 KIAA1456Q9P272 454 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms