RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 PPA2Q9H2U2 334 aa4.85□□□□□ -1.63
SSX3-201ENST00000298396 GHRLQ9UBU3 117 aa4.85□□□□□ -1.63
SSX3-201ENST00000298396 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
SSX3-201ENST00000298396 CLN8Q9UBY8 286 aa4.85□□□□□ -1.63
SSX3-201ENST00000298396 RPUSD1Q9UJJ7 312 aaKnown RBP4.85□□□□□ -1.63
SSX3-201ENST00000298396 ELF5Q9UKW6 265 aaPredicted RBP4.85□□□□□ -1.63
SSX3-201ENST00000298396 KCNK7Q9Y2U2 307 aa4.85□□□□□ -1.63
SSX3-201ENST00000298396 C2CD3Q4AC94 2353 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PLXNB1O43157 2135 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 LOC105371242A0A075B767 164 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 TRAV39A0A0B4J263 110 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A10PA6NDY2 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A18PA6NE21 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A16PA6NEW6 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A20PA6NIJ5 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A8PA6NJQ4 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A7PA6NKC0 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A22PA8MWA6 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A12PA8MX19 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A5PA8MXJ8 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A23PA8MXZ1 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 B4DSR2 109 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 RAB27BO00194 218 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 HSPB6O14558 160 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 SH2D1BO14796 132 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 DEGS1O15121 323 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 NDUFB3O43676 98 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 ZNF780AO75290 641 aaPredicted RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 PDCD6O75340 191 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 MMP23AO75900 390 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 OR7C1O76099 320 aaPredicted RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 TGFAP01135 160 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FSHBP01225 129 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PLA2G1BP04054 148 aaKnown RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 CSTBP04080 98 aaKnown RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 CSN2P05814 226 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CHRM2P08172 466 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A15PP0C7V4 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A13PP0C7W8 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A14PP0C7W9 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM90A24PP0C7X0 464 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CGB3P0DN86 165 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CGB7P0DN87 165 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 ZNF44P15621 663 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 NDUFB7P17568 137 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CPT2P23786 658 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 GLIPR1P48060 266 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 GZMKP49863 264 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 NPY4RP50391 375 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PSMD7P51665 324 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 BMXP51813 675 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CAPZA1P52907 286 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 DVL1P1P54792 670 aaPredicted RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 GNB2P62879 340 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PAX5Q02548 391 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PRB3Q04118 309 aaPredicted RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 PAX8Q06710 450 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 AESQ08117 197 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 GPR176Q14439 515 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 GRK1Q15835 563 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 MPV17LQ2QL34 196 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 ESCO2Q56NI9 601 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PAN3Q58A45 887 aaKnown RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 LRRC10Q5BKY1 277 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PRR31Q5SQ13 230 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 TMEM200BQ69YZ2 307 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CYB5R2Q6BCY4 276 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 RAB12Q6IQ22 244 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 HCP5Q6MZN7 132 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 BAIAP2L2Q6UXY1 529 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 USP43Q70EL4 1123 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 C6orf201Q7Z4U5 140 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 LINC00596Q86U02 117 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CMTM4Q8IZR5 234 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 GAPTQ8N292 157 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 Q8N7P7 452 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 DTX3Q8N9I9 347 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CHST4Q8NCG5 386 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PTX4Q96A99 478 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 TMEM186Q96B77 213 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 MRPS24Q96EL2 167 aaKnown RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 MED30Q96HR3 178 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 ARHGAP5-AS1Q96IT6 56 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 S100A13Q99584 98 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 BCL7BQ9BQE9 202 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 NUDT16L1Q9BRJ7 211 aaKnown RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 HDHD3Q9BSH5 251 aaPredicted RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 SLIRPQ9GZT3 109 aaKnown RBP4.84□□□□□ -1.63
SSX3-201ENST00000298396 FAM234AQ9H0X4 552 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 SIRPDQ9H106 197 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 CST11Q9H112 138 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 MIXL1Q9H2W2 232 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 HIF1ANQ9NWT6 349 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 RAB22AQ9UL26 194 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 INSIG2Q9Y5U4 225 aa4.84□□□□□ -1.63
SSX3-201ENST00000298396 PPIAL4CA0A0B4J2A2 164 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 KIR2DS1A0A191URI9 304 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 ODAMA1E959 279 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 UBE2QL1A1L167 161 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 MFNGO00587 321 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms