RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 AUP1Q9Y679 476 aa17.36■□□□□ 0.37
PKP3-205ENST00000527442 FSTL3O95633 263 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 IGHV2-70P01814 119 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 TALDO1P37837 337 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 SEC61A1P61619 476 aaKnown RBP17.35■□□□□ 0.37
PKP3-205ENST00000527442 LSAMPQ13449 338 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 TEX36Q5VZQ5 186 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 OR4M1Q8NGD0 313 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 OR56B1Q8NGI3 324 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 DIRAS2Q96HU8 199 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 ATG5Q9H1Y0 275 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 IFT22Q9H7X7 185 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 SEBOXQ9HB31 216 aaPredicted RBP17.35■□□□□ 0.37
PKP3-205ENST00000527442 AKIP1Q9NQ31 210 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 EXTL2Q9UBQ6 330 aa17.35■□□□□ 0.37
PKP3-205ENST00000527442 GEMIN2O14893 280 aaKnown RBP17.34■□□□□ 0.37
PKP3-205ENST00000527442 TPPPO94811 219 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 MDKP21741 143 aaPredicted RBP17.34■□□□□ 0.37
PKP3-205ENST00000527442 CDK2P24941 298 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 MNDAP41218 407 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 VEGFCP49767 419 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 HOXA4Q00056 320 aaPredicted RBP17.34■□□□□ 0.37
PKP3-205ENST00000527442 SLC9A3R2Q15599 337 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 TAF9Q16594 264 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 METAP1DQ6UB28 335 aaPredicted RBP17.34■□□□□ 0.37
PKP3-205ENST00000527442 BAIAP2L2Q6UXY1 529 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 DIABLOQ9NR28 239 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 RCC2Q9P258 522 aaKnown RBP17.34■□□□□ 0.37
PKP3-205ENST00000527442 NLKQ9UBE8 527 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 RABL2AQ9UBK7 228 aaPredicted RBP17.34■□□□□ 0.37
PKP3-205ENST00000527442 RABL2BQ9UNT1 228 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 V9GYH0 126 aa17.34■□□□□ 0.37
PKP3-205ENST00000527442 OOEPA6NGQ2 149 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 C3orf80F5H4A9 247 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 LGALS8O00214 317 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 XRCC3O43542 346 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 MUC1P15941 1255 aaPredicted RBP17.33■□□□□ 0.36
PKP3-205ENST00000527442 CD80P33681 288 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 PITPNBP48739 271 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 MOGAT2Q3SYC2 334 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 MFSD4AQ8N468 514 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 OR10R2Q8NGX6 335 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 S100ZQ8WXG8 99 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 PHF21AQ96BD5 680 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 SOSTQ9BQB4 213 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 POLR3KQ9Y2Y1 108 aaPredicted RBP17.33■□□□□ 0.36
PKP3-205ENST00000527442 INSIG2Q9Y5U4 225 aa17.33■□□□□ 0.36
PKP3-205ENST00000527442 SOX21Q9Y651 276 aaPredicted RBP17.33■□□□□ 0.36
PKP3-205ENST00000527442 H3BUI4 141 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 CLDN34H7C241 214 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 GABRR1P24046 479 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 SNU13P55769 128 aaKnown RBP17.32■□□□□ 0.36
PKP3-205ENST00000527442 GMFBP60983 142 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 SPANXN2Q5MJ10 180 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 TMEM69Q5SWH9 247 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 FAM201AQ5SY85 155 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 STUMQ69YW2 141 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 SIGIRRQ6IA17 410 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 Q6P435 159 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 SEH1LQ96EE3 360 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 PATZ1Q9HBE1 687 aaKnown RBP17.32■□□□□ 0.36
PKP3-205ENST00000527442 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.32■□□□□ 0.36
PKP3-205ENST00000527442 DNAJB11Q9UBS4 358 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 ZNF222Q9UK12 451 aa17.32■□□□□ 0.36
PKP3-205ENST00000527442 SOCS1O15524 211 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 OR7C1O76099 320 aaPredicted RBP17.31■□□□□ 0.36
PKP3-205ENST00000527442 HAND1O96004 215 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 PSG2P11465 335 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 OMGP23515 440 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 PTBP1P26599 531 aaKnown RBP eCLIP17.31■□□□□ 0.36
PKP3-205ENST00000527442 CHATP28329 748 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 TAS2R20P59543 309 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 IKZF1Q13422 519 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 MICBQ29980 383 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 BOLLQ8N9W6 283 aaKnown RBP17.31■□□□□ 0.36
PKP3-205ENST00000527442 TSC22D3Q99576 134 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 SPACA1Q9HBV2 294 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 GLS2Q9UI32 602 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 HSF4Q9ULV5 492 aa17.31■□□□□ 0.36
PKP3-205ENST00000527442 IGHV3OR16-10A0A075B7F0 116 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 TRAV38-1A0A0B4J264 116 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 FABP12A6NFH5 140 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 OR2AT4A6NND4 320 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 A8MXK9 166 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 MFNGO00587 321 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 PDCD6O75340 191 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 IGHV4-38-2P0DP08 117 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 HIST1H1DP16402 221 aaKnown RBP17.3■□□□□ 0.36
PKP3-205ENST00000527442 BLVRBP30043 206 aaPredicted RBP17.3■□□□□ 0.36
PKP3-205ENST00000527442 TMEM50BP56557 158 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 BTG1P62324 171 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 ZNF45Q02386 682 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 SRSF4Q08170 494 aaKnown RBP17.3■□□□□ 0.36
PKP3-205ENST00000527442 ARL6IP1Q15041 203 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 SPICQ8N5J4 248 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 CHST4Q8NCG5 386 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 ANGPTL6Q8NI99 470 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 RAB3CQ96E17 227 aa17.3■□□□□ 0.36
PKP3-205ENST00000527442 MS4A7Q9GZW8 240 aaPredicted RBP17.3■□□□□ 0.36
PKP3-205ENST00000527442 ZNF581Q9P0T4 197 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms