RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 HERVK_113P61574 105 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 SLC35A1P78382 337 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 HMGCS1Q01581 520 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 OR4D1Q15615 310 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 PRSS8Q16651 343 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 NCBP2-AS2Q69YL0 99 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 CEMP1Q6PRD7 247 aaPredicted RBP5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 Q6ZT83 130 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 CTAGE3PQ8IX95 158 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 C11orf42Q8N5U0 333 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 DNAAF3Q8N9W5 541 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 TMEM158Q8WZ71 300 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 ZNF488Q96MN9 340 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 OLFM3Q96PB7 478 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 PLA2G2FQ9BZM2 168 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 TRIM4Q9C037 500 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 SRRQ9GZT4 340 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 HDHD2Q9H0R4 259 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 ZDHHC4Q9NPG8 344 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 TREX1Q9NSU2 369 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 WIF1Q9Y5W5 379 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 PUS1Q9Y606 427 aaKnown RBP eCLIP5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 AKAP13Q12802 2813 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 FBN2P35556 2912 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 LAMA1P25391 3075 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 NUP210Q8TEM1 1887 aaPredicted RBP5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 ZNF638Q14966 1978 aaKnown RBP5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 SCN1AP35498 2009 aa5.11□□□□□ -1.59
GAPVD1-217ENST00000479511 LAMA5O15230 3695 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 C1orf232A0A0U1RR37 186 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 FAM240AA0A1B0GVK7 77 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 H0Y9J4 135 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 M0R1B8 84 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 CDC40O60508 579 aaKnown RBP eCLIP5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 KDELR2P33947 212 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 NUDT1P36639 197 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 XKP51811 444 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 ZNF136P52737 540 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 UBE2NP61088 152 aaKnown RBP5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 GNB2P62879 340 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 PPIDQ08752 370 aaKnown RBP5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 STX4Q12846 297 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 SPANXN3Q5MJ09 141 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 SYPL2Q5VXT5 272 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 FBXW9Q5XUX1 488 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 ZNF774Q6NX45 483 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 SPAG17Q6Q759 2223 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 SDK1Q7Z5N4 2213 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 PAIP2Q9BPZ3 127 aaKnown RBP5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 ZNF225Q9UK10 706 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 ARL2BPQ9Y2Y0 163 aa5.1□□□□□ -1.59
GAPVD1-217ENST00000479511 ANK1P16157 1881 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 COPEO14579 308 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 ITGB1BP1O14713 200 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 HDAC3O15379 428 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 HCRTO43612 131 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 DCTN3O75935 186 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 GABARAPO95166 117 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 CD8AP01732 235 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 HLA-GP17693 338 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 OMGP23515 440 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 CDKN2DP55273 166 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 PDGFRLQ15198 375 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 OTPQ5XKR4 325 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 TIFABQ6ZNK6 161 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 TAC4Q86UU9 113 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 OR6X1Q8NH79 312 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 TNFRSF14Q92956 283 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 RDH12Q96NR8 316 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 PKMYT1Q99640 499 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 LINC00597Q9H2U6 94 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 SAV1Q9H4B6 383 aaPredicted RBP5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 FAM96AQ9H5X1 160 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 WDR55Q9H6Y2 383 aaPredicted RBP5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 TMEM100Q9NV29 134 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 NLE1Q9NVX2 485 aaPredicted RBP5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 RBFOX1Q9NWB1 397 aaKnown RBP5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 COL6A6A6NMZ7 2263 aa5.09□□□□□ -1.59
GAPVD1-217ENST00000479511 TET2Q6N021 2002 aaPredicted RBP5.09□□□□□ -1.6
GAPVD1-217ENST00000479511 URB1O60287 2271 aaKnown RBP5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 PIKFYVEQ9Y2I7 2098 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 TRAV19A0A0A6YYK7 116 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 IGHV3-74A0A0B4J1X5 117 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 IGHV1-69DA0A0B4J2H0 117 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 SLC5A10A0PJK1 596 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 FABP12A6NFH5 140 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 FAM159BA6NKW6 160 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 CLDN34H7C241 214 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 PFDN6O15212 129 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 BIRC5O15392 142 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 MFSD11O43934 449 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 IGKV1D-16P01601 117 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 IGLV3-25P01717 112 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 IGHV4-34P06331 123 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 GIMD1P0DJR0 217 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 KLK2P20151 261 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 TSPAN5P62079 268 aa5.08□□□□□ -1.6
GAPVD1-217ENST00000479511 MAPRE2Q15555 327 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms