RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TMEM82A0PJX8 343 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 H7C1Q1 480 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 GYPAP02724 150 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 AMY2AP04746 511 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 CSN2P05814 226 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 COL8A2P25067 703 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 CDKN1AP38936 164 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 KCNJ3P48549 501 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 CCR6P51684 374 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 TAS2R46P59540 309 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 CHRFAM7AQ494W8 412 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 Q6ZNX1 250 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 C17orf107Q6ZR85 190 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 DUSP18Q8NEJ0 188 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 OR5H2Q8NGV7 314 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 OR56B4Q8NH76 319 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 PPP1R35Q8TAP8 253 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 MRPL30Q8TCC3 161 aaKnown RBP17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 PLEKHF2Q9H8W4 249 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 ZNF286AQ9HBT8 521 aa17.08■□□□□ 0.33
VCPKMT-202ENST00000395860 IGKV1D-8A0A087WSZ0 117 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 LYNX1G3V0Z9 82 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 LYNX1P0DP58 116 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 OR3A1P47881 315 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 OR3A3P47888 321 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 PLET1Q6UQ28 207 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 ZNF497Q6ZNH5 498 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 C20orf204Q6ZNR8 217 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 Q6ZPA2 131 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 ZNF561Q8N587 486 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 OR5AP2Q8NGF4 316 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 MMP28Q9H239 520 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 ZNF665Q9H7R5 613 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 DLL4Q9NR61 685 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 ANXA10Q9UJ72 324 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 DISC1C4P0D8 188 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 ZNF737O75373 536 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 ARPC4P59998 168 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 GRK1Q15835 563 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 PLA1AQ53H76 456 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 OR51S1Q8NGJ8 323 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 SNX22Q96L94 193 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 SHARPINQ9H0F6 387 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 Q9N2K0 584 aa17.07■□□□□ 0.32
VCPKMT-202ENST00000395860 TRBV6-6A0A0A6YYG2 114 aa17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 A0A1B0GVG6 124 aa17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 IFNA6P05013 189 aa17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 SRSF7Q16629 238 aaKnown RBP eCLIP17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 ZNRF1Q8ND25 227 aa17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 SDSLQ96GA7 329 aa17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 COPZ2Q9P299 210 aa17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 MAB21L2Q9Y586 359 aa17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 LRBAP50851 2863 aa17.06■□□□□ 0.32
VCPKMT-202ENST00000395860 TMEM30CPA0ZSE6 113 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 NKX6-3A6NJ46 265 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 LY6HO94772 140 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 AESQ08117 197 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 RSBN1Q5VWQ0 802 aaPredicted RBP17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 SLC35E4Q6ICL7 350 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 ZNF788Q6ZQV5 615 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 CCDC107Q8WV48 283 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 GAFA1Q96PS6 74 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 CCL13Q99616 98 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 SLC6A7Q99884 636 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 MYOZ1Q9NP98 299 aaPredicted RBP17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 TRAPPC2LQ9UL33 140 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 POM121CA8CG34 1229 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 TCRBP04435 133 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 ZNF735P0CB33 412 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 DAOP14920 347 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 MRPS11P82912 194 aaKnown RBP17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 CDK10Q15131 360 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 SCGB2B2Q4G0G5 96 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 KRBOX4Q5JUW0 171 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 VAX1Q5SQQ9 334 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 Q6ZS49 121 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 PEG10Q86TG7 708 aaKnown RBP17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 GAPTQ8N292 157 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 EHFQ9NZC4 300 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 SCP2D1Q9UJQ7 156 aa17.05■□□□□ 0.32
VCPKMT-202ENST00000395860 K7N7A8 449 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 MGST3O14880 152 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 TK1P04183 234 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 BTG1P62324 171 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 KCNJ8Q15842 424 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 ATPAF1Q5TC12 328 aaPredicted RBP17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 ZNF880Q6PDB4 577 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 MOB1BQ7L9L4 216 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 OR5D13Q8NGL4 314 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 COQ2Q96H96 371 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 PRRT1Q99946 306 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 DNTTIP1Q9H147 329 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 NECAP2Q9NVZ3 263 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 NUBP2Q9Y5Y2 271 aa17.04■□□□□ 0.32
VCPKMT-202ENST00000395860 KIR2DS1A0A191URI9 304 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 SDCBPO00560 298 aaPredicted RBP17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 TMPRSS2O15393 492 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 RP2O75695 350 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 GSTT2P0CG29 244 aa17.03■□□□□ 0.32
VCPKMT-202ENST00000395860 KIR2DS4P43632 304 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms