RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 STUMQ69YW2 141 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 CLEC18BQ6UXF7 455 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 GAPTQ8N292 157 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 CLEC18CQ8NCF0 446 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 OR5AP2Q8NGF4 316 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 MARVELD1Q9BSK0 173 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 SHARPINQ9H0F6 387 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 NUDT15Q9NV35 164 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 ANXA10Q9UJ72 324 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 TACC2O95359 2948 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 DSCAMO60469 2012 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 IGHV1-69-2A0A0G2JMI3 117 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 OOEPA6NGQ2 149 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 ZNF737O75373 536 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 PLA2G2AP14555 144 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 MDH2P40926 338 aaKnown RBP15.57■□□□□ 0.08
CLN3-206ENST00000360019 GABRA2P47869 451 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 ACTBL2Q562R1 376 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 ZNF497Q6ZNH5 498 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 DEFB108BQ8NET1 73 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 OR5H2Q8NGV7 314 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 Q9N2K0 584 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 ING3Q9NXR8 418 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 COPZ2Q9P299 210 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 FBXO9Q9UK97 447 aaPredicted RBP15.57■□□□□ 0.08
CLN3-206ENST00000360019 NUBP2Q9Y5Y2 271 aa15.57■□□□□ 0.08
CLN3-206ENST00000360019 TRAV6A0A075B6T7 132 aa15.56■□□□□ 0.08
CLN3-206ENST00000360019 TRBV6-6A0A0A6YYG2 114 aa15.56■□□□□ 0.08
CLN3-206ENST00000360019 TAS2R46P59540 309 aa15.56■□□□□ 0.08
CLN3-206ENST00000360019 AKAP6Q13023 2319 aa15.56■□□□□ 0.08
CLN3-206ENST00000360019 C1orf87Q8N0U7 546 aa15.56■□□□□ 0.08
CLN3-206ENST00000360019 ASCC1Q8N9N2 400 aaKnown RBP15.56■□□□□ 0.08
CLN3-206ENST00000360019 CREB3L1Q96BA8 519 aa15.56■□□□□ 0.08
CLN3-206ENST00000360019 RIMS4Q9H426 269 aaPredicted RBP15.56■□□□□ 0.08
CLN3-206ENST00000360019 ZNF286AQ9HBT8 521 aa15.56■□□□□ 0.08
CLN3-206ENST00000360019 SLC2A8Q9NY64 477 aa15.56■□□□□ 0.08
CLN3-206ENST00000360019 A1L4Q6 167 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 DISC1C4P0D8 188 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 NDUFB6O95139 128 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 MUC1P15941 1255 aaPredicted RBP15.55■□□□□ 0.08
CLN3-206ENST00000360019 SRSF7Q16629 238 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLN3-206ENST00000360019 CHRFAM7AQ494W8 412 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 RSBN1Q5VWQ0 802 aaPredicted RBP15.55■□□□□ 0.08
CLN3-206ENST00000360019 ZNF880Q6PDB4 577 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 Q6ZS49 121 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 BTN2A1Q7KYR7 527 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 OVCH2Q7RTZ1 564 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 C5orf24Q7Z6I8 188 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 RAB1BQ9H0U4 201 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 C20orf85Q9H1P6 137 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 FLVCR2Q9UPI3 526 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 MAB21L2Q9Y586 359 aa15.55■□□□□ 0.08
CLN3-206ENST00000360019 USP9YO00507 2555 aaPredicted RBP15.55■□□□□ 0.08
CLN3-206ENST00000360019 A0A0B4J293 547 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 A0A1B0GW55 424 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 SDCBPO00560 298 aaPredicted RBP15.54■□□□□ 0.08
CLN3-206ENST00000360019 GYPAP02724 150 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 DUX4L2P0CJ85 424 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 DUX4L3P0CJ86 424 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 DUX4L4P0CJ87 422 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 DUX4L5P0CJ88 424 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 DUX4L6P0CJ89 424 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 DUX4L7P0CJ90 424 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 RAB25P57735 213 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 ARPC4P59998 168 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 DUX4L9Q6RFH8 374 aaPredicted RBP15.54■□□□□ 0.08
CLN3-206ENST00000360019 IDO2Q6ZQW0 420 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 ZNRF1Q8ND25 227 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 OR13C8Q8NGS7 320 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 MRGPRFQ96AM1 343 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 COQ2Q96H96 371 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 EHFQ9NZC4 300 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 DUX4Q9UBX2 424 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 PPIAL4EA0A075B759 164 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 PPIAL4DF5H284 164 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 INMT-MINDY4F8WBC2 141 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 LYNX1G3V0Z9 82 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 LGALS8O00214 317 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 GSTT2P0CG29 244 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 PPIAL4FP0DN26 164 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 LYNX1P0DP58 116 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 SELLP14151 372 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 RCC1P18754 421 aaPredicted RBP15.54■□□□□ 0.08
CLN3-206ENST00000360019 COL8A2P25067 703 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 OR3A3P47888 321 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 AESQ08117 197 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 CDK10Q15131 360 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 RBMS2Q15434 407 aaKnown RBP15.54■□□□□ 0.08
CLN3-206ENST00000360019 SCGB2B2Q4G0G5 96 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 ARRDC1Q8N5I2 433 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 SDSLQ96GA7 329 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 GAFA1Q96PS6 74 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 PRRT1Q99946 306 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 GINS4Q9BRT9 223 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 PPIAL4AQ9Y536 164 aa15.54■□□□□ 0.08
CLN3-206ENST00000360019 USF3Q68DE3 2245 aa15.53■□□□□ 0.08
CLN3-206ENST00000360019 TRAV39A0A0B4J263 110 aa15.53■□□□□ 0.08
CLN3-206ENST00000360019 LY6HO94772 140 aa15.53■□□□□ 0.08
CLN3-206ENST00000360019 IFNA6P05013 189 aa15.53■□□□□ 0.08
CLN3-206ENST00000360019 KCNJ3P48549 501 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms