RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ASCL3Q9NQ33 180 aa15.16■□□□□ 0.02
SHANK1-201ENST00000293441 ANKRD20A5PA0PJZ0 165 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 OGG1O15527 345 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 ZNHIT1O43257 154 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 TGOLN2O43493 480 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 GFRA3O60609 400 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 TEX261Q6UWH6 196 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 TMEM18Q96B42 140 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 LOXL4Q96JB6 756 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 U3KQ87 197 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 PRF1P14222 555 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 PLPPR5Q32ZL2 321 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 RNASEKQ6P5S7 137 aaKnown RBP15.15■□□□□ 0.02
SHANK1-201ENST00000293441 WFDC3Q8IUB2 231 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 GAPTQ8N292 157 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 UFC1Q9Y3C8 167 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 TMEM210A6NLX4 147 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 J3QT63 122 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 COL10A1Q03692 680 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 HSBP1O75506 76 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 PDPNQ86YL7 162 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 GZMHP20718 246 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 IL11P20809 199 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 ZBTB44Q8NCP5 570 aa15.15■□□□□ 0.02
SHANK1-201ENST00000293441 C1QAP02745 245 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 RBM14Q96PK6 669 aaKnown RBP15.14■□□□□ 0.01
SHANK1-201ENST00000293441 MS4A7Q9GZW8 240 aaPredicted RBP15.14■□□□□ 0.01
SHANK1-201ENST00000293441 IGKV1D-16P01601 117 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 REG1BP48304 166 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 GGTLC2Q14390 218 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 COMMD1Q8N668 190 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 FLYWCH2Q96CP2 140 aaKnown RBP15.14■□□□□ 0.01
SHANK1-201ENST00000293441 HARBI1Q96MB7 349 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 PRDM6Q9NQX0 595 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 GPR6P46095 362 aaPredicted RBP15.14■□□□□ 0.01
SHANK1-201ENST00000293441 CCL8P80075 99 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.14■□□□□ 0.01
SHANK1-201ENST00000293441 MMP26Q9NRE1 261 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 SCO1O75880 301 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 MPC2O95563 127 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 UBE2L3P68036 154 aaKnown RBP15.14■□□□□ 0.01
SHANK1-201ENST00000293441 OR5A2Q8NGI9 324 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 PPIAL4EA0A075B759 164 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 A0A1W2PPE3 182 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 PPIAL4DF5H284 164 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 PPIAL4FP0DN26 164 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 CLEC2AQ6UVW9 174 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 SPICQ8N5J4 248 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 LILRB1Q8NHL6 650 aaPredicted RBP15.14■□□□□ 0.01
SHANK1-201ENST00000293441 WDFY2Q96P53 400 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 CCL28Q9NRJ3 127 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 PPIAL4AQ9Y536 164 aa15.14■□□□□ 0.01
SHANK1-201ENST00000293441 UPK3AO75631 287 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 FABP4P15090 132 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 TMEM251Q8N6I4 163 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 NAT8BQ9UHF3 227 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 PILRBQ9UKJ0 227 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 SPAG17Q6Q759 2223 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 ADAP1O75689 374 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 CD200P41217 278 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 COL4A5P29400 1685 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 TRBV23-1A0A0A0MS06 115 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 CTSDP07339 412 aaPredicted RBP15.13■□□□□ 0.01
SHANK1-201ENST00000293441 FAHD2BQ6P2I3 314 aaPredicted RBP15.13■□□□□ 0.01
SHANK1-201ENST00000293441 FAHD2AQ96GK7 314 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 CENPVL1A0A0U1RR11 272 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 NEURL1O76050 574 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 G6PCP35575 357 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 HLA-DRB3P79483 266 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 ATP6V1FQ16864 119 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 C19orf48Q6RUI8 117 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 SLC25A45Q8N413 288 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 A0A0J9YW62 118 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 GATCO43716 136 aaKnown RBP15.13■□□□□ 0.01
SHANK1-201ENST00000293441 STARD6P59095 220 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 KRTCAP3Q53RY4 240 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 ABHD1Q96SE0 405 aa15.13■□□□□ 0.01
SHANK1-201ENST00000293441 LSM11P83369 360 aaKnown RBP eCLIP15.12■□□□□ 0.01
SHANK1-201ENST00000293441 TMEM241Q24JQ0 296 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 DDA1Q9BW61 102 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 FBXL17Q9UF56 701 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 CCL27Q9Y4X3 112 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 HTR1DP28221 377 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 GSTZ1O43708 216 aaPredicted RBP15.12■□□□□ 0.01
SHANK1-201ENST00000293441 INHBBP09529 407 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 COL13A1Q5TAT6 717 aaPredicted RBP15.12■□□□□ 0.01
SHANK1-201ENST00000293441 ZNF488Q96MN9 340 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 LINC00052Q96N35 136 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 RNF122Q9H9V4 155 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 PIPOXQ9P0Z9 390 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 PCDHGA9Q9Y5G4 932 aaKnown RBP15.12■□□□□ 0.01
SHANK1-201ENST00000293441 LIPGQ9Y5X9 500 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 WSB1Q9Y6I7 421 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 IGHV3-21A0A0B4J1V1 117 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 RPEL1Q2QD12 228 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 RBPMS2Q6ZRY4 209 aaKnown RBP15.12■□□□□ 0.01
SHANK1-201ENST00000293441 RPS4Y2Q8TD47 263 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 PCMT1P22061 227 aa15.12■□□□□ 0.01
SHANK1-201ENST00000293441 ID4P47928 161 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms